Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 DNM1P48-201ENST00000419538 439 ntBASIC12.27□□□□□ -0.45
RIPPLY3P57055 AC136604.1-202ENST00000425471 771 ntBASIC12.27□□□□□ -0.45
RIPPLY3P57055 AL512306.1-201ENST00000432698 848 ntBASIC12.27□□□□□ -0.45
RIPPLY3P57055 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 MIR4321-201ENST00000592276 80 ntBASIC12.27□□□□□ -0.45
RIPPLY3P57055 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 AP001184.1-201ENST00000637936 376 ntBASIC12.27□□□□□ -0.45
RIPPLY3P57055 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RIPPLY3P57055 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.27□□□□□ -0.45
RIPPLY3P57055 LRRC59-203ENST00000576448 1531 ntBASIC12.27□□□□□ -0.45
RIPPLY3P57055 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 AL138799.1-201ENST00000448213 1675 ntBASIC12.26□□□□□ -0.45
RIPPLY3P57055 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 AC126335.2-201ENST00000623362 4637 ntBASIC12.26□□□□□ -0.45
RIPPLY3P57055 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 ST20-AS1-201ENST00000560255 4223 ntBASIC12.26□□□□□ -0.45
RIPPLY3P57055 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 MED15P3-201ENST00000413613 326 ntBASIC12.26□□□□□ -0.45
RIPPLY3P57055 AC098657.1-201ENST00000416270 1135 ntBASIC12.26□□□□□ -0.45
RIPPLY3P57055 AHCYP3-201ENST00000420053 1279 ntBASIC12.26□□□□□ -0.45
RIPPLY3P57055 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 SCARNA12-201ENST00000459155 270 ntBASIC12.26□□□□□ -0.45
RIPPLY3P57055 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 AC106047.2-201ENST00000511723 743 ntBASIC12.26□□□□□ -0.45
RIPPLY3P57055 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 NAT9-219ENST00000582524 573 ntTSL 4 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 AP000322.3-201ENST00000608665 388 ntBASIC12.26□□□□□ -0.45
RIPPLY3P57055 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC12.26□□□□□ -0.45
RIPPLY3P57055 AC002044.2-201ENST00000624910 970 ntBASIC12.26□□□□□ -0.45
RIPPLY3P57055 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 AC012508.2-201ENST00000567613 1472 ntBASIC12.26□□□□□ -0.45
RIPPLY3P57055 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.26□□□□□ -0.45
RIPPLY3P57055 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RIPPLY3P57055 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms