Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HADHBP55084 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHBP55084 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.28■□□□□ 0.04
HADHBP55084 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HADHBP55084 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
HADHBP55084 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HADHBP55084 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HADHBP55084 AL161772.1-201ENST00000610494 4412 ntBASIC15.27■□□□□ 0.04
HADHBP55084 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HADHBP55084 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.27■□□□□ 0.04
HADHBP55084 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
HADHBP55084 PPT1-213ENST00000641319 2388 ntBASIC15.27■□□□□ 0.04
HADHBP55084 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HADHBP55084 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.27■□□□□ 0.04
HADHBP55084 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.27■□□□□ 0.04
HADHBP55084 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HADHBP55084 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HADHBP55084 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HADHBP55084 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.27■□□□□ 0.04
HADHBP55084 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
HADHBP55084 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HADHBP55084 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HADHBP55084 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.27■□□□□ 0.04
HADHBP55084 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HADHBP55084 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
HADHBP55084 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HADHBP55084 AC006001.1-201ENST00000325130 474 ntBASIC15.27■□□□□ 0.04
HADHBP55084 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.27■□□□□ 0.04
HADHBP55084 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.27■□□□□ 0.04
HADHBP55084 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.27■□□□□ 0.04
HADHBP55084 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.27■□□□□ 0.04
HADHBP55084 AK2P2-201ENST00000439142 405 ntBASIC15.27■□□□□ 0.04
HADHBP55084 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.27■□□□□ 0.04
HADHBP55084 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HADHBP55084 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.27■□□□□ 0.04
HADHBP55084 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.27■□□□□ 0.04
HADHBP55084 AC078819.1-201ENST00000547454 765 ntBASIC15.27■□□□□ 0.04
HADHBP55084 AC012085.1-201ENST00000548270 765 ntBASIC15.27■□□□□ 0.04
HADHBP55084 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HADHBP55084 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.27■□□□□ 0.04
HADHBP55084 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.27■□□□□ 0.04
HADHBP55084 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HADHBP55084 AC233724.13-201ENST00000598383 410 ntBASIC15.27■□□□□ 0.04
HADHBP55084 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.27■□□□□ 0.04
HADHBP55084 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HADHBP55084 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HADHBP55084 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HADHBP55084 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
HADHBP55084 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HADHBP55084 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HADHBP55084 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HADHBP55084 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
HADHBP55084 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HADHBP55084 TMBIM7P-202ENST00000641474 1516 ntBASIC15.27■□□□□ 0.03
HADHBP55084 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HADHBP55084 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HADHBP55084 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
HADHBP55084 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.26■□□□□ 0.03
HADHBP55084 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.26■□□□□ 0.03
HADHBP55084 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 SHC1P1-201ENST00000425230 1745 ntBASIC15.26■□□□□ 0.03
HADHBP55084 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.26■□□□□ 0.03
HADHBP55084 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.26■□□□□ 0.03
HADHBP55084 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HADHBP55084 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HADHBP55084 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.26■□□□□ 0.03
HADHBP55084 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.26■□□□□ 0.03
HADHBP55084 AC016694.1-201ENST00000434179 700 ntBASIC15.26■□□□□ 0.03
HADHBP55084 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 ST13P19-201ENST00000442505 1124 ntBASIC15.26■□□□□ 0.03
HADHBP55084 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HADHBP55084 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.26■□□□□ 0.03
HADHBP55084 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.26■□□□□ 0.03
HADHBP55084 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.26■□□□□ 0.03
HADHBP55084 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
HADHBP55084 AL022328.1-201ENST00000610050 478 ntBASIC15.26■□□□□ 0.03
HADHBP55084 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HADHBP55084 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.26■□□□□ 0.03
HADHBP55084 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HADHBP55084 AL591122.2-201ENST00000624125 1853 ntBASIC15.26■□□□□ 0.03
HADHBP55084 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HADHBP55084 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.26■□□□□ 0.03
HADHBP55084 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HADHBP55084 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms