Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC10.75□□□□□ -0.69
APOC4P55056 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC10.75□□□□□ -0.69
APOC4P55056 PCBP2-OT1-201ENST00000634357 590 ntBASIC10.75□□□□□ -0.69
APOC4P55056 AC068587.10-201ENST00000641210 219 ntBASIC10.75□□□□□ -0.69
APOC4P55056 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
APOC4P55056 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 FES-204ENST00000414248 2327 ntTSL 2 BASIC10.75□□□□□ -0.69
APOC4P55056 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC10.75□□□□□ -0.69
APOC4P55056 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC10.75□□□□□ -0.69
APOC4P55056 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.75□□□□□ -0.69
APOC4P55056 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 MBP-202ENST00000355994 2772 ntTSL 5 BASIC10.75□□□□□ -0.69
APOC4P55056 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC10.75□□□□□ -0.69
APOC4P55056 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC10.75□□□□□ -0.69
APOC4P55056 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOC4P55056 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 AC013268.4-201ENST00000637413 2228 ntBASIC10.74□□□□□ -0.69
APOC4P55056 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC10.74□□□□□ -0.69
APOC4P55056 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC10.74□□□□□ -0.69
APOC4P55056 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC10.74□□□□□ -0.69
APOC4P55056 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.74□□□□□ -0.69
APOC4P55056 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
APOC4P55056 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 SLC16A6P1-201ENST00000413214 1059 ntBASIC10.74□□□□□ -0.69
APOC4P55056 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 AC078875.1-201ENST00000431907 724 ntBASIC10.74□□□□□ -0.69
APOC4P55056 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC10.74□□□□□ -0.69
APOC4P55056 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 REEP1-202ENST00000453231 940 ntTSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
APOC4P55056 AP001505.2-201ENST00000616815 443 ntBASIC10.74□□□□□ -0.69
APOC4P55056 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
APOC4P55056 Z98259.2-201ENST00000641583 609 ntBASIC10.74□□□□□ -0.69
APOC4P55056 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 AHCYP4-201ENST00000419201 1315 ntBASIC10.74□□□□□ -0.69
APOC4P55056 TUBBP5-203ENST00000508529 1334 ntBASIC10.74□□□□□ -0.69
APOC4P55056 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 AC126177.1-201ENST00000547829 2218 ntBASIC10.74□□□□□ -0.69
APOC4P55056 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
APOC4P55056 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 MBLAC2-202ENST00000514906 1936 ntBASIC10.74□□□□□ -0.69
APOC4P55056 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
APOC4P55056 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 AC091951.1-201ENST00000512854 2465 ntBASIC10.74□□□□□ -0.69
APOC4P55056 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
APOC4P55056 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
APOC4P55056 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 AC018442.1-201ENST00000421439 2061 ntBASIC10.73□□□□□ -0.69
APOC4P55056 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms