Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.12■□□□□ 0.17
PMS1P54277 C2orf69P2-201ENST00000562032 1123 ntBASIC16.12■□□□□ 0.17
PMS1P54277 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.12■□□□□ 0.17
PMS1P54277 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.12■□□□□ 0.17
PMS1P54277 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.12■□□□□ 0.17
PMS1P54277 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.12■□□□□ 0.17
PMS1P54277 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 AL354989.2-201ENST00000435838 1540 ntBASIC16.12■□□□□ 0.17
PMS1P54277 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.12■□□□□ 0.17
PMS1P54277 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PMS1P54277 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
PMS1P54277 AL022313.4-201ENST00000562756 2046 ntBASIC16.12■□□□□ 0.17
PMS1P54277 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.12■□□□□ 0.17
PMS1P54277 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PMS1P54277 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.11■□□□□ 0.17
PMS1P54277 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PMS1P54277 CU639417.3-201ENST00000624240 1404 ntBASIC16.11■□□□□ 0.17
PMS1P54277 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.11■□□□□ 0.17
PMS1P54277 OR2I1P-210ENST00000642037 4691 ntBASIC16.11■□□□□ 0.17
PMS1P54277 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.11■□□□□ 0.17
PMS1P54277 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.11■□□□□ 0.17
PMS1P54277 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PMS1P54277 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
PMS1P54277 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PMS1P54277 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.11■□□□□ 0.17
PMS1P54277 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.11■□□□□ 0.17
PMS1P54277 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.11■□□□□ 0.17
PMS1P54277 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 NME2P1-201ENST00000426182 414 ntBASIC16.11■□□□□ 0.17
PMS1P54277 AL161932.2-201ENST00000435436 679 ntBASIC16.11■□□□□ 0.17
PMS1P54277 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.11■□□□□ 0.17
PMS1P54277 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.11■□□□□ 0.17
PMS1P54277 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PMS1P54277 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.11■□□□□ 0.17
PMS1P54277 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PMS1P54277 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.11■□□□□ 0.17
PMS1P54277 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PMS1P54277 AC064801.2-201ENST00000625052 1303 ntBASIC16.11■□□□□ 0.17
PMS1P54277 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.11■□□□□ 0.17
PMS1P54277 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.11■□□□□ 0.17
PMS1P54277 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PMS1P54277 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
PMS1P54277 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC16.11■□□□□ 0.17
PMS1P54277 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 AC105206.1-202ENST00000314927 2368 ntBASIC16.11■□□□□ 0.17
PMS1P54277 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMS1P54277 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.1■□□□□ 0.17
PMS1P54277 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.1■□□□□ 0.17
PMS1P54277 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.1■□□□□ 0.17
PMS1P54277 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.1■□□□□ 0.17
PMS1P54277 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC16.1■□□□□ 0.17
PMS1P54277 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 MIR1202-201ENST00000408529 83 ntBASIC16.1■□□□□ 0.17
PMS1P54277 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.1■□□□□ 0.17
PMS1P54277 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PMS1P54277 CHMP1AP1-201ENST00000445563 662 ntBASIC16.1■□□□□ 0.17
PMS1P54277 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PMS1P54277 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
PMS1P54277 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.1■□□□□ 0.17
PMS1P54277 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms