Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDK7P50613 AC009093.10-201ENST00000641956 1442 ntBASIC16.11■□□□□ 0.17
CDK7P50613 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDK7P50613 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.1■□□□□ 0.17
CDK7P50613 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.1■□□□□ 0.17
CDK7P50613 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK7P50613 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDK7P50613 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.1■□□□□ 0.17
CDK7P50613 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.1■□□□□ 0.17
CDK7P50613 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK7P50613 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.1■□□□□ 0.17
CDK7P50613 BCAS2P2-201ENST00000425064 674 ntBASIC16.1■□□□□ 0.17
CDK7P50613 AL139008.1-201ENST00000437894 228 ntBASIC16.1■□□□□ 0.17
CDK7P50613 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.1■□□□□ 0.17
CDK7P50613 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK7P50613 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDK7P50613 LINC00634-202ENST00000505157 222 ntBASIC16.1■□□□□ 0.17
CDK7P50613 AC026410.1-201ENST00000507366 1101 ntBASIC16.1■□□□□ 0.17
CDK7P50613 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.1■□□□□ 0.17
CDK7P50613 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK7P50613 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK7P50613 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDK7P50613 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK7P50613 MRPL37P1-201ENST00000592451 1337 ntBASIC16.1■□□□□ 0.17
CDK7P50613 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDK7P50613 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDK7P50613 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDK7P50613 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.1■□□□□ 0.17
CDK7P50613 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CDK7P50613 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDK7P50613 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.1■□□□□ 0.17
CDK7P50613 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.09■□□□□ 0.17
CDK7P50613 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.09■□□□□ 0.17
CDK7P50613 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.09■□□□□ 0.17
CDK7P50613 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDK7P50613 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.09■□□□□ 0.17
CDK7P50613 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.09■□□□□ 0.17
CDK7P50613 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CDK7P50613 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CDK7P50613 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CDK7P50613 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.09■□□□□ 0.17
CDK7P50613 GUSBP10-201ENST00000417412 665 ntBASIC16.09■□□□□ 0.17
CDK7P50613 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.09■□□□□ 0.17
CDK7P50613 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.09■□□□□ 0.17
CDK7P50613 ST13P19-201ENST00000442505 1124 ntBASIC16.09■□□□□ 0.17
CDK7P50613 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CDK7P50613 AC084752.1-201ENST00000509766 622 ntBASIC16.09■□□□□ 0.17
CDK7P50613 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.09■□□□□ 0.17
CDK7P50613 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.09■□□□□ 0.17
CDK7P50613 AC006158.1-201ENST00000610661 249 ntBASIC16.09■□□□□ 0.17
CDK7P50613 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDK7P50613 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDK7P50613 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.09■□□□□ 0.17
CDK7P50613 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.09■□□□□ 0.17
CDK7P50613 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.09■□□□□ 0.17
CDK7P50613 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.09■□□□□ 0.17
CDK7P50613 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDK7P50613 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDK7P50613 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.08■□□□□ 0.17
CDK7P50613 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDK7P50613 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.08■□□□□ 0.17
CDK7P50613 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDK7P50613 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.08■□□□□ 0.17
CDK7P50613 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.08■□□□□ 0.17
CDK7P50613 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDK7P50613 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDK7P50613 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.08■□□□□ 0.17
CDK7P50613 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDK7P50613 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK7P50613 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDK7P50613 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.08■□□□□ 0.16
CDK7P50613 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CDK7P50613 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.08■□□□□ 0.16
CDK7P50613 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.08■□□□□ 0.16
CDK7P50613 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.08■□□□□ 0.16
CDK7P50613 DPY19L2P5-201ENST00000456300 331 ntBASIC16.08■□□□□ 0.16
CDK7P50613 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CDK7P50613 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms