Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
MMP13P45452 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MMP13P45452 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MMP13P45452 CLUHP2-201ENST00000426660 1303 ntBASIC15.29■□□□□ 0.04
MMP13P45452 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.29■□□□□ 0.04
MMP13P45452 AC007969.1-201ENST00000433675 447 ntBASIC15.29■□□□□ 0.04
MMP13P45452 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.29■□□□□ 0.04
MMP13P45452 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.29■□□□□ 0.04
MMP13P45452 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
MMP13P45452 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.29■□□□□ 0.04
MMP13P45452 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.29■□□□□ 0.04
MMP13P45452 AC106886.1-201ENST00000568660 600 ntBASIC15.29■□□□□ 0.04
MMP13P45452 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP13P45452 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.29■□□□□ 0.04
MMP13P45452 ECM1P1-201ENST00000604092 1279 ntBASIC15.29■□□□□ 0.04
MMP13P45452 AC244669.2-201ENST00000612320 853 ntBASIC15.29■□□□□ 0.04
MMP13P45452 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.29■□□□□ 0.04
MMP13P45452 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP13P45452 AC015909.5-201ENST00000624336 2266 ntBASIC15.29■□□□□ 0.04
MMP13P45452 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
MMP13P45452 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
MMP13P45452 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.29■□□□□ 0.04
MMP13P45452 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MMP13P45452 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MMP13P45452 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP13P45452 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MMP13P45452 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP13P45452 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP13P45452 AC023794.5-201ENST00000564380 2157 ntBASIC15.28■□□□□ 0.04
MMP13P45452 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP13P45452 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP13P45452 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP13P45452 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP13P45452 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MMP13P45452 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP13P45452 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP13P45452 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MMP13P45452 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP13P45452 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP13P45452 AL590640.2-201ENST00000457038 527 ntBASIC15.28■□□□□ 0.04
MMP13P45452 CROCCP4-201ENST00000457096 498 ntBASIC15.28■□□□□ 0.04
MMP13P45452 RNA5SP486-201ENST00000515961 83 ntBASIC15.28■□□□□ 0.04
MMP13P45452 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.28■□□□□ 0.04
MMP13P45452 KRT17P8-201ENST00000540749 863 ntBASIC15.28■□□□□ 0.04
MMP13P45452 KRT90P-201ENST00000549264 1064 ntBASIC15.28■□□□□ 0.04
MMP13P45452 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.28■□□□□ 0.04
MMP13P45452 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.28■□□□□ 0.04
MMP13P45452 AL162274.1-201ENST00000617191 1098 ntBASIC15.28■□□□□ 0.04
MMP13P45452 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.28■□□□□ 0.04
MMP13P45452 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP13P45452 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.28■□□□□ 0.04
MMP13P45452 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
MMP13P45452 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP13P45452 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP13P45452 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MMP13P45452 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP13P45452 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MMP13P45452 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP13P45452 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
MMP13P45452 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP13P45452 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP13P45452 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP13P45452 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP13P45452 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MMP13P45452 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP13P45452 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.28■□□□□ 0.04
MMP13P45452 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP13P45452 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP13P45452 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP13P45452 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
MMP13P45452 NUTM2HP-201ENST00000442076 2498 ntBASIC15.27■□□□□ 0.04
MMP13P45452 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP13P45452 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MMP13P45452 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.27■□□□□ 0.04
MMP13P45452 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
MMP13P45452 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP13P45452 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP13P45452 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP13P45452 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms