Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCD3P28288 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.53□□□□□ -0.24
ABCD3P28288 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
ABCD3P28288 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.53□□□□□ -0.24
ABCD3P28288 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.53□□□□□ -0.24
ABCD3P28288 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.53□□□□□ -0.24
ABCD3P28288 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ABCD3P28288 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.53□□□□□ -0.24
ABCD3P28288 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCD3P28288 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ABCD3P28288 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.53□□□□□ -0.24
ABCD3P28288 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ABCD3P28288 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 KRT8P29-201ENST00000420409 1371 ntBASIC13.53□□□□□ -0.24
ABCD3P28288 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ABCD3P28288 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.53□□□□□ -0.24
ABCD3P28288 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ABCD3P28288 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ABCD3P28288 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ABCD3P28288 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCD3P28288 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
ABCD3P28288 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCD3P28288 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.52□□□□□ -0.24
ABCD3P28288 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ABCD3P28288 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.52□□□□□ -0.24
ABCD3P28288 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.52□□□□□ -0.24
ABCD3P28288 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.52□□□□□ -0.24
ABCD3P28288 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
ABCD3P28288 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
ABCD3P28288 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
ABCD3P28288 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
ABCD3P28288 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
ABCD3P28288 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ABCD3P28288 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
ABCD3P28288 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.24
ABCD3P28288 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ABCD3P28288 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
ABCD3P28288 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.52□□□□□ -0.25
ABCD3P28288 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.52□□□□□ -0.25
ABCD3P28288 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.52□□□□□ -0.25
ABCD3P28288 AL157407.1-201ENST00000435784 904 ntBASIC13.52□□□□□ -0.25
ABCD3P28288 AC012441.2-201ENST00000444843 739 ntBASIC13.52□□□□□ -0.25
ABCD3P28288 KLF2P1-201ENST00000447438 1042 ntBASIC13.52□□□□□ -0.25
ABCD3P28288 AC104306.2-201ENST00000451877 341 ntBASIC13.52□□□□□ -0.25
ABCD3P28288 TUBB8P8-201ENST00000458717 1058 ntBASIC13.52□□□□□ -0.25
ABCD3P28288 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.52□□□□□ -0.25
ABCD3P28288 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.52□□□□□ -0.25
ABCD3P28288 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.52□□□□□ -0.25
ABCD3P28288 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ABCD3P28288 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.52□□□□□ -0.25
ABCD3P28288 AC009884.2-201ENST00000603110 324 ntBASIC13.52□□□□□ -0.25
ABCD3P28288 AC007663.3-201ENST00000609632 465 ntBASIC13.52□□□□□ -0.25
ABCD3P28288 AL023803.2-201ENST00000620080 638 ntBASIC13.52□□□□□ -0.25
ABCD3P28288 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
ABCD3P28288 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 AL008718.2-201ENST00000609206 1313 ntBASIC13.52□□□□□ -0.25
ABCD3P28288 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ABCD3P28288 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 AL122018.1-201ENST00000446607 2310 ntBASIC13.52□□□□□ -0.25
ABCD3P28288 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
ABCD3P28288 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCD3P28288 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
ABCD3P28288 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.51□□□□□ -0.25
ABCD3P28288 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.51□□□□□ -0.25
ABCD3P28288 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.51□□□□□ -0.25
ABCD3P28288 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.51□□□□□ -0.25
ABCD3P28288 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.51□□□□□ -0.25
ABCD3P28288 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 AC215219.1-201ENST00000400706 1817 ntBASIC13.51□□□□□ -0.25
ABCD3P28288 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.51□□□□□ -0.25
ABCD3P28288 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms