Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AP006547.1-201ENST00000563435 692 ntBASIC16.01■□□□□ 0.15
RFX1P22670 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RFX1P22670 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.01■□□□□ 0.15
RFX1P22670 GNRHR2-203ENST00000581100 1187 ntBASIC16.01■□□□□ 0.15
RFX1P22670 EEF1DP1-201ENST00000585891 896 ntBASIC16.01■□□□□ 0.15
RFX1P22670 BX088702.1-201ENST00000610784 235 ntBASIC16.01■□□□□ 0.15
RFX1P22670 AP001002.3-201ENST00000623482 206 ntBASIC16.01■□□□□ 0.15
RFX1P22670 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.01■□□□□ 0.15
RFX1P22670 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.01■□□□□ 0.15
RFX1P22670 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16■□□□□ 0.15
RFX1P22670 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16■□□□□ 0.15
RFX1P22670 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RFX1P22670 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16■□□□□ 0.15
RFX1P22670 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16■□□□□ 0.15
RFX1P22670 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16■□□□□ 0.15
RFX1P22670 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16■□□□□ 0.15
RFX1P22670 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16■□□□□ 0.15
RFX1P22670 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16■□□□□ 0.15
RFX1P22670 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16■□□□□ 0.15
RFX1P22670 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16■□□□□ 0.15
RFX1P22670 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16■□□□□ 0.15
RFX1P22670 FXNP2-201ENST00000411625 547 ntBASIC16■□□□□ 0.15
RFX1P22670 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16■□□□□ 0.15
RFX1P22670 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16■□□□□ 0.15
RFX1P22670 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RFX1P22670 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RFX1P22670 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
RFX1P22670 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RFX1P22670 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16■□□□□ 0.15
RFX1P22670 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 AP000593.2-201ENST00000542775 1433 ntBASIC16■□□□□ 0.15
RFX1P22670 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16■□□□□ 0.15
RFX1P22670 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16■□□□□ 0.15
RFX1P22670 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16■□□□□ 0.15
RFX1P22670 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFX1P22670 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.99■□□□□ 0.15
RFX1P22670 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.99■□□□□ 0.15
RFX1P22670 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.99■□□□□ 0.15
RFX1P22670 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.99■□□□□ 0.15
RFX1P22670 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.99■□□□□ 0.15
RFX1P22670 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.99■□□□□ 0.15
RFX1P22670 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.99■□□□□ 0.15
RFX1P22670 EIF4HP1-201ENST00000453115 687 ntBASIC15.99■□□□□ 0.15
RFX1P22670 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFX1P22670 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.99■□□□□ 0.15
RFX1P22670 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.99■□□□□ 0.15
RFX1P22670 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.99■□□□□ 0.15
RFX1P22670 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RFX1P22670 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.99■□□□□ 0.15
RFX1P22670 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.99■□□□□ 0.15
RFX1P22670 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
RFX1P22670 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RFX1P22670 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.99■□□□□ 0.15
RFX1P22670 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX1P22670 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
RFX1P22670 AL354989.2-201ENST00000435838 1540 ntBASIC15.99■□□□□ 0.15
RFX1P22670 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.99■□□□□ 0.15
RFX1P22670 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.98■□□□□ 0.15
RFX1P22670 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.98■□□□□ 0.15
RFX1P22670 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms