Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
COL9A1P20849 SALL4P5-201ENST00000419001 1760 ntBASIC14.96□□□□□ -0.02
COL9A1P20849 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.95□□□□□ -0.02
COL9A1P20849 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.95□□□□□ -0.02
COL9A1P20849 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
COL9A1P20849 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.95□□□□□ -0.02
COL9A1P20849 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
COL9A1P20849 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC14.95□□□□□ -0.02
COL9A1P20849 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
COL9A1P20849 THAP4-203ENST00000402545 833 ntTSL 5 BASIC14.95□□□□□ -0.02
COL9A1P20849 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 RPS14P4-201ENST00000415880 418 ntBASIC14.95□□□□□ -0.02
COL9A1P20849 AC013410.2-201ENST00000422627 201 ntBASIC14.95□□□□□ -0.02
COL9A1P20849 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC14.95□□□□□ -0.02
COL9A1P20849 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.95□□□□□ -0.02
COL9A1P20849 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.95□□□□□ -0.02
COL9A1P20849 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC14.95□□□□□ -0.02
COL9A1P20849 RN7SL23P-201ENST00000484055 275 ntBASIC14.95□□□□□ -0.02
COL9A1P20849 RN7SL87P-201ENST00000497657 288 ntBASIC14.95□□□□□ -0.02
COL9A1P20849 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 AC114947.1-202ENST00000514136 344 ntBASIC14.95□□□□□ -0.02
COL9A1P20849 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.95□□□□□ -0.02
COL9A1P20849 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.95□□□□□ -0.02
COL9A1P20849 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
COL9A1P20849 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
COL9A1P20849 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
COL9A1P20849 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC14.95□□□□□ -0.02
COL9A1P20849 SRP14-208ENST00000560773 468 ntTSL 3 BASIC14.95□□□□□ -0.02
COL9A1P20849 AC007952.4-201ENST00000573866 637 ntBASIC14.95□□□□□ -0.02
COL9A1P20849 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.95□□□□□ -0.02
COL9A1P20849 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC14.95□□□□□ -0.02
COL9A1P20849 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.95□□□□□ -0.02
COL9A1P20849 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC14.95□□□□□ -0.02
COL9A1P20849 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.95□□□□□ -0.02
COL9A1P20849 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.95□□□□□ -0.02
COL9A1P20849 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.95□□□□□ -0.02
COL9A1P20849 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.95□□□□□ -0.02
COL9A1P20849 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.95□□□□□ -0.02
COL9A1P20849 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.95□□□□□ -0.02
COL9A1P20849 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.95□□□□□ -0.02
COL9A1P20849 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL9A1P20849 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL9A1P20849 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
COL9A1P20849 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.94□□□□□ -0.02
COL9A1P20849 AC008536.3-201ENST00000623282 1599 ntBASIC14.94□□□□□ -0.02
COL9A1P20849 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL9A1P20849 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL9A1P20849 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL9A1P20849 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
COL9A1P20849 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL9A1P20849 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL9A1P20849 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL9A1P20849 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL9A1P20849 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL9A1P20849 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL9A1P20849 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
COL9A1P20849 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
COL9A1P20849 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
COL9A1P20849 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
COL9A1P20849 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
COL9A1P20849 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
COL9A1P20849 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC14.94□□□□□ -0.02
COL9A1P20849 AC026884.1-201ENST00000418296 457 ntBASIC14.94□□□□□ -0.02
COL9A1P20849 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.94□□□□□ -0.02
COL9A1P20849 AC108734.2-201ENST00000420887 1069 ntBASIC14.94□□□□□ -0.02
COL9A1P20849 TLE1P1-201ENST00000422965 589 ntBASIC14.94□□□□□ -0.02
COL9A1P20849 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.94□□□□□ -0.02
COL9A1P20849 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL9A1P20849 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL9A1P20849 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC14.94□□□□□ -0.02
COL9A1P20849 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC14.94□□□□□ -0.02
COL9A1P20849 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC14.94□□□□□ -0.02
COL9A1P20849 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC14.94□□□□□ -0.02
COL9A1P20849 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.94□□□□□ -0.02
COL9A1P20849 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC14.94□□□□□ -0.02
COL9A1P20849 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL9A1P20849 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
COL9A1P20849 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC14.94□□□□□ -0.02
COL9A1P20849 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.94□□□□□ -0.02
COL9A1P20849 AL160191.2-201ENST00000603975 601 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms