Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC103563.1-201ENST00000429316 123 ntBASIC14.7□□□□□ -0.06
VCANP13611 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC14.7□□□□□ -0.06
VCANP13611 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC14.7□□□□□ -0.06
VCANP13611 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
VCANP13611 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
VCANP13611 AC048382.6-201ENST00000621980 1223 ntBASIC14.7□□□□□ -0.06
VCANP13611 AC148476.1-201ENST00000622182 705 ntBASIC14.7□□□□□ -0.06
VCANP13611 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VCANP13611 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC14.7□□□□□ -0.06
VCANP13611 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
VCANP13611 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VCANP13611 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCANP13611 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCANP13611 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC14.7□□□□□ -0.06
VCANP13611 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VCANP13611 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.7□□□□□ -0.06
VCANP13611 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
VCANP13611 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.7□□□□□ -0.06
VCANP13611 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.7□□□□□ -0.06
VCANP13611 AC139712.1-201ENST00000378256 1875 ntBASIC14.7□□□□□ -0.06
VCANP13611 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCANP13611 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCANP13611 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VCANP13611 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.7□□□□□ -0.06
VCANP13611 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.7□□□□□ -0.06
VCANP13611 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCANP13611 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VCANP13611 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
VCANP13611 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
VCANP13611 DUX4L31-201ENST00000446466 1136 ntBASIC14.7□□□□□ -0.06
VCANP13611 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC14.7□□□□□ -0.06
VCANP13611 MIR6749-201ENST00000617008 69 ntBASIC14.7□□□□□ -0.06
VCANP13611 AC091769.1-201ENST00000619576 568 ntBASIC14.7□□□□□ -0.06
VCANP13611 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.7□□□□□ -0.06
VCANP13611 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VCANP13611 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VCANP13611 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.7□□□□□ -0.06
VCANP13611 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
VCANP13611 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCANP13611 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC14.69□□□□□ -0.06
VCANP13611 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCANP13611 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.69□□□□□ -0.06
VCANP13611 NEMF-210ENST00000556672 590 ntTSL 2 BASIC14.69□□□□□ -0.06
VCANP13611 AC090616.6-202ENST00000583601 1088 ntBASIC14.69□□□□□ -0.06
VCANP13611 RPS5-205ENST00000598495 800 ntTSL 3 BASIC14.69□□□□□ -0.06
VCANP13611 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
VCANP13611 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.69□□□□□ -0.06
VCANP13611 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.69□□□□□ -0.06
VCANP13611 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.69□□□□□ -0.06
VCANP13611 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.69□□□□□ -0.06
VCANP13611 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VCANP13611 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCANP13611 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.69□□□□□ -0.06
VCANP13611 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCANP13611 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.69□□□□□ -0.06
VCANP13611 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
VCANP13611 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.69□□□□□ -0.06
VCANP13611 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC14.69□□□□□ -0.06
VCANP13611 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC14.69□□□□□ -0.06
VCANP13611 HNRNPA1P73-201ENST00000446472 928 ntBASIC14.69□□□□□ -0.06
VCANP13611 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.69□□□□□ -0.06
VCANP13611 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC14.69□□□□□ -0.06
VCANP13611 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
VCANP13611 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.69□□□□□ -0.06
VCANP13611 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCANP13611 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VCANP13611 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.69□□□□□ -0.06
VCANP13611 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.68□□□□□ -0.06
VCANP13611 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.68□□□□□ -0.06
VCANP13611 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 AC104117.4-201ENST00000521486 847 ntBASIC14.68□□□□□ -0.06
VCANP13611 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.68□□□□□ -0.06
VCANP13611 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC14.68□□□□□ -0.06
VCANP13611 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC14.68□□□□□ -0.06
VCANP13611 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
VCANP13611 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
VCANP13611 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
VCANP13611 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
VCANP13611 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCANP13611 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 POP5-201ENST00000341039 913 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 RNF7-202ENST00000393000 805 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 GCOM2-201ENST00000509133 1104 ntBASIC14.68□□□□□ -0.06
VCANP13611 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
VCANP13611 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 PMM2-216ENST00000569958 698 ntTSL 2 BASIC14.68□□□□□ -0.06
VCANP13611 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC14.68□□□□□ -0.06
VCANP13611 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
VCANP13611 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
VCANP13611 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms