Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC136759.1-202ENST00000530858 2194 ntBASIC11.5□□□□□ -0.57
CD28P10747 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.5□□□□□ -0.57
CD28P10747 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CD28P10747 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC11.5□□□□□ -0.57
CD28P10747 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC11.5□□□□□ -0.57
CD28P10747 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CD28P10747 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.5□□□□□ -0.57
CD28P10747 EEF1DP6-201ENST00000449232 372 ntBASIC11.5□□□□□ -0.57
CD28P10747 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC11.5□□□□□ -0.57
CD28P10747 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC11.5□□□□□ -0.57
CD28P10747 AC009779.1-201ENST00000551138 283 ntBASIC11.5□□□□□ -0.57
CD28P10747 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC11.5□□□□□ -0.57
CD28P10747 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC11.5□□□□□ -0.57
CD28P10747 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CD28P10747 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
CD28P10747 AL353726.2-201ENST00000623259 884 ntBASIC11.5□□□□□ -0.57
CD28P10747 AC079336.7-201ENST00000623428 1078 ntBASIC11.5□□□□□ -0.57
CD28P10747 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC11.5□□□□□ -0.57
CD28P10747 Z98259.2-201ENST00000641583 609 ntBASIC11.5□□□□□ -0.57
CD28P10747 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
CD28P10747 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
CD28P10747 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
CD28P10747 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.5□□□□□ -0.57
CD28P10747 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CD28P10747 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CD28P10747 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CD28P10747 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CD28P10747 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CD28P10747 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11.5□□□□□ -0.57
CD28P10747 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CD28P10747 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC11.5□□□□□ -0.57
CD28P10747 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 TNRC18P2-201ENST00000417666 2714 ntBASIC11.5□□□□□ -0.57
CD28P10747 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CD28P10747 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC11.49□□□□□ -0.57
CD28P10747 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.49□□□□□ -0.57
CD28P10747 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
CD28P10747 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.49□□□□□ -0.57
CD28P10747 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.49□□□□□ -0.57
CD28P10747 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC11.49□□□□□ -0.57
CD28P10747 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.49□□□□□ -0.57
CD28P10747 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CD28P10747 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.49□□□□□ -0.57
CD28P10747 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CD28P10747 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC11.49□□□□□ -0.57
CD28P10747 ISCA2P1-201ENST00000425548 448 ntBASIC11.49□□□□□ -0.57
CD28P10747 AC006335.1-201ENST00000445200 547 ntBASIC11.49□□□□□ -0.57
CD28P10747 AL596276.2-201ENST00000447525 331 ntBASIC11.49□□□□□ -0.57
CD28P10747 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC11.49□□□□□ -0.57
CD28P10747 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC11.49□□□□□ -0.57
CD28P10747 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.49□□□□□ -0.57
CD28P10747 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
CD28P10747 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
CD28P10747 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC11.49□□□□□ -0.57
CD28P10747 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC11.49□□□□□ -0.57
CD28P10747 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CD28P10747 CENPX-208ENST00000584347 799 ntTSL 2 BASIC11.49□□□□□ -0.57
CD28P10747 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 AC020922.3-201ENST00000595064 547 ntBASIC11.49□□□□□ -0.57
CD28P10747 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CD28P10747 AF254983.2-201ENST00000612331 135 ntBASIC11.49□□□□□ -0.57
CD28P10747 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.49□□□□□ -0.57
CD28P10747 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC11.49□□□□□ -0.57
CD28P10747 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.49□□□□□ -0.57
CD28P10747 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CD28P10747 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CD28P10747 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
CD28P10747 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms