Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DQB2P05538 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 AC136759.1-202ENST00000530858 2194 ntBASIC14.84□□□□□ -0.03
HLA-DQB2P05538 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.84□□□□□ -0.03
HLA-DQB2P05538 AL161932.2-201ENST00000435436 679 ntBASIC14.84□□□□□ -0.03
HLA-DQB2P05538 GOLGA2P4-201ENST00000441462 777 ntBASIC14.84□□□□□ -0.03
HLA-DQB2P05538 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 AL096828.3-201ENST00000615354 462 ntBASIC14.84□□□□□ -0.03
HLA-DQB2P05538 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 AC064801.2-201ENST00000625052 1303 ntBASIC14.84□□□□□ -0.03
HLA-DQB2P05538 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQB2P05538 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
HLA-DQB2P05538 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.83□□□□□ -0.04
HLA-DQB2P05538 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 AC005586.2-201ENST00000563946 837 ntBASIC14.83□□□□□ -0.04
HLA-DQB2P05538 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DQB2P05538 AL928921.2-201ENST00000641325 2442 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms