Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
P04436 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
P04436 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 VDAC1P1-201ENST00000439229 848 ntBASIC13.39□□□□□ -0.27
P04436 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.39□□□□□ -0.27
P04436 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.39□□□□□ -0.27
P04436 RN7SL11P-201ENST00000471305 293 ntBASIC13.39□□□□□ -0.27
P04436 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.39□□□□□ -0.27
P04436 AC006122.1-201ENST00000493323 440 ntBASIC13.39□□□□□ -0.27
P04436 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.39□□□□□ -0.27
P04436 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.39□□□□□ -0.27
P04436 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.39□□□□□ -0.27
P04436 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.39□□□□□ -0.27
P04436 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.39□□□□□ -0.27
P04436 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.39□□□□□ -0.27
P04436 AL132994.2-201ENST00000603120 687 ntBASIC13.39□□□□□ -0.27
P04436 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.39□□□□□ -0.27
P04436 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 AC144522.1-201ENST00000625111 1658 ntBASIC13.39□□□□□ -0.27
P04436 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
P04436 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.39□□□□□ -0.27
P04436 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.39□□□□□ -0.27
P04436 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 INTS4P1-203ENST00000641008 3683 ntBASIC13.39□□□□□ -0.27
P04436 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
P04436 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
P04436 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
P04436 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.39□□□□□ -0.27
P04436 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.39□□□□□ -0.27
P04436 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.39□□□□□ -0.27
P04436 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.39□□□□□ -0.27
P04436 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 TUBBP5-203ENST00000508529 1334 ntBASIC13.39□□□□□ -0.27
P04436 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.39□□□□□ -0.27
P04436 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04436 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
P04436 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
P04436 AC136759.1-202ENST00000530858 2194 ntBASIC13.38□□□□□ -0.27
P04436 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
P04436 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.38□□□□□ -0.27
P04436 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.38□□□□□ -0.27
P04436 AL157791.1-201ENST00000553667 1699 ntBASIC13.38□□□□□ -0.27
P04436 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
P04436 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 FAM90A7P-201ENST00000382628 1395 ntBASIC13.38□□□□□ -0.27
P04436 FAM90A23P-201ENST00000400136 1395 ntBASIC13.38□□□□□ -0.27
P04436 RN7SKP214-201ENST00000364208 315 ntBASIC13.38□□□□□ -0.27
P04436 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.38□□□□□ -0.27
P04436 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.38□□□□□ -0.27
P04436 RCC2P8-201ENST00000502779 1035 ntBASIC13.38□□□□□ -0.27
P04436 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.38□□□□□ -0.27
P04436 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.38□□□□□ -0.27
P04436 AC009779.1-201ENST00000551138 283 ntBASIC13.38□□□□□ -0.27
P04436 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.38□□□□□ -0.27
P04436 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.38□□□□□ -0.27
P04436 AL645939.5-201ENST00000606834 243 ntBASIC13.38□□□□□ -0.27
P04436 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
P04436 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
P04436 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.38□□□□□ -0.27
P04436 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
P04436 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.38□□□□□ -0.27
P04436 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.38□□□□□ -0.27
P04436 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.38□□□□□ -0.27
P04436 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.38□□□□□ -0.27
P04436 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.38□□□□□ -0.27
P04436 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
P04436 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
P04436 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04436 KHSRPP1-201ENST00000427983 1768 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms