Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CHRNA1P02708 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA1P02708 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CHRNA1P02708 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA1P02708 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA1P02708 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA1P02708 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.79■□□□□ 0.12
CHRNA1P02708 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.79■□□□□ 0.12
CHRNA1P02708 LYPLA2P1-203ENST00000447689 696 ntBASIC15.79■□□□□ 0.12
CHRNA1P02708 PIN4P1-201ENST00000451079 396 ntBASIC15.79■□□□□ 0.12
CHRNA1P02708 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.79■□□□□ 0.12
CHRNA1P02708 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA1P02708 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.79■□□□□ 0.12
CHRNA1P02708 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.79■□□□□ 0.12
CHRNA1P02708 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CHRNA1P02708 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CHRNA1P02708 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA1P02708 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.79■□□□□ 0.12
CHRNA1P02708 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA1P02708 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CHRNA1P02708 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CHRNA1P02708 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CHRNA1P02708 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA1P02708 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CHRNA1P02708 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA1P02708 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHRNA1P02708 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.78■□□□□ 0.12
CHRNA1P02708 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.78■□□□□ 0.12
CHRNA1P02708 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA1P02708 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA1P02708 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 MIR645-201ENST00000385283 94 ntBASIC15.78■□□□□ 0.12
CHRNA1P02708 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.78■□□□□ 0.12
CHRNA1P02708 RPL18AP8-201ENST00000486071 528 ntBASIC15.78■□□□□ 0.12
CHRNA1P02708 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.78■□□□□ 0.12
CHRNA1P02708 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.78■□□□□ 0.12
CHRNA1P02708 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.78■□□□□ 0.12
CHRNA1P02708 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHRNA1P02708 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 AC140658.4-201ENST00000561990 352 ntBASIC15.78■□□□□ 0.12
CHRNA1P02708 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.78■□□□□ 0.12
CHRNA1P02708 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHRNA1P02708 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA1P02708 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHRNA1P02708 IL9RP3-201ENST00000442856 1674 ntBASIC15.78■□□□□ 0.12
CHRNA1P02708 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHRNA1P02708 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHRNA1P02708 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA1P02708 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA1P02708 AL354702.1-201ENST00000442006 1960 ntBASIC15.78■□□□□ 0.12
CHRNA1P02708 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA1P02708 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA1P02708 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHRNA1P02708 LAP3P2-201ENST00000454686 1454 ntBASIC15.78■□□□□ 0.12
CHRNA1P02708 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CHRNA1P02708 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.77■□□□□ 0.12
CHRNA1P02708 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.77■□□□□ 0.12
CHRNA1P02708 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA1P02708 AC104640.1-201ENST00000562617 2109 ntBASIC15.77■□□□□ 0.12
CHRNA1P02708 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA1P02708 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.77■□□□□ 0.12
CHRNA1P02708 AC025271.4-201ENST00000621477 1726 ntBASIC15.77■□□□□ 0.12
CHRNA1P02708 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms