Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PPP1R3DO95685 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 AC020910.5-201ENST00000623668 1865 ntBASIC13.31□□□□□ -0.28
PPP1R3DO95685 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 PEG13-201ENST00000631594 5667 ntBASIC13.31□□□□□ -0.28
PPP1R3DO95685 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 MIR6074-201ENST00000612054 107 ntBASIC13.31□□□□□ -0.28
PPP1R3DO95685 AJ011932.1-201ENST00000621707 465 ntBASIC13.31□□□□□ -0.28
PPP1R3DO95685 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 CLUHP2-201ENST00000426660 1303 ntBASIC13.31□□□□□ -0.28
PPP1R3DO95685 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP1R3DO95685 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.31□□□□□ -0.28
PPP1R3DO95685 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 TSPY16P-201ENST00000449843 468 ntBASIC13.3□□□□□ -0.28
PPP1R3DO95685 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 AC022137.2-201ENST00000503482 481 ntBASIC13.3□□□□□ -0.28
PPP1R3DO95685 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 WASH4P-201ENST00000564273 1246 ntBASIC13.3□□□□□ -0.28
PPP1R3DO95685 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 AC138696.2-201ENST00000607376 223 ntBASIC13.3□□□□□ -0.28
PPP1R3DO95685 WFDC1-204ENST00000613603 549 ntBASIC13.3□□□□□ -0.28
PPP1R3DO95685 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PPP1R3DO95685 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.3□□□□□ -0.28
PPP1R3DO95685 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms