Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.12□□□□□ -0.31
CEACAM4O75871 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CEACAM4O75871 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
CEACAM4O75871 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM4O75871 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CEACAM4O75871 AC006987.1-201ENST00000413610 527 ntBASIC13.12□□□□□ -0.31
CEACAM4O75871 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM4O75871 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 RN7SL396P-201ENST00000471086 295 ntBASIC13.12□□□□□ -0.31
CEACAM4O75871 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.12□□□□□ -0.31
CEACAM4O75871 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC13.12□□□□□ -0.31
CEACAM4O75871 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.12□□□□□ -0.31
CEACAM4O75871 AC226150.1-201ENST00000544259 466 ntBASIC13.12□□□□□ -0.31
CEACAM4O75871 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 AC006158.1-201ENST00000610661 249 ntBASIC13.12□□□□□ -0.31
CEACAM4O75871 AC244250.3-201ENST00000620749 366 ntBASIC13.12□□□□□ -0.31
CEACAM4O75871 LINC00244-201ENST00000625073 613 ntBASIC13.12□□□□□ -0.31
CEACAM4O75871 AC002472.4-201ENST00000641915 272 ntBASIC13.12□□□□□ -0.31
CEACAM4O75871 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CEACAM4O75871 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 AC021305.1-201ENST00000520656 1514 ntBASIC13.12□□□□□ -0.31
CEACAM4O75871 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CEACAM4O75871 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 AC007950.2-201ENST00000615045 2347 ntBASIC13.12□□□□□ -0.31
CEACAM4O75871 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM4O75871 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.12□□□□□ -0.31
CEACAM4O75871 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM4O75871 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CEACAM4O75871 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CEACAM4O75871 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CEACAM4O75871 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.11□□□□□ -0.31
CEACAM4O75871 AC025183.3-201ENST00000623526 1482 ntBASIC13.11□□□□□ -0.31
CEACAM4O75871 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
CEACAM4O75871 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM4O75871 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.11□□□□□ -0.31
CEACAM4O75871 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CEACAM4O75871 RNVU1-8-201ENST00000364272 125 ntBASIC13.11□□□□□ -0.31
CEACAM4O75871 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CEACAM4O75871 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CEACAM4O75871 BX679664.3-201ENST00000414070 555 ntBASIC13.11□□□□□ -0.31
CEACAM4O75871 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM4O75871 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM4O75871 AQP7P5-201ENST00000428759 1049 ntBASIC13.11□□□□□ -0.31
CEACAM4O75871 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC13.11□□□□□ -0.31
CEACAM4O75871 AQP7P4-201ENST00000447083 1042 ntBASIC13.11□□□□□ -0.31
CEACAM4O75871 AQP7P2-201ENST00000453967 1041 ntBASIC13.11□□□□□ -0.31
CEACAM4O75871 AC113935.1-201ENST00000471722 555 ntBASIC13.11□□□□□ -0.31
CEACAM4O75871 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM4O75871 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CEACAM4O75871 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CEACAM4O75871 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.11□□□□□ -0.31
CEACAM4O75871 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.11□□□□□ -0.31
CEACAM4O75871 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CEACAM4O75871 AQP7P3-201ENST00000624547 1041 ntBASIC13.11□□□□□ -0.31
CEACAM4O75871 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC13.11□□□□□ -0.31
CEACAM4O75871 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM4O75871 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM4O75871 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM4O75871 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
CEACAM4O75871 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.11□□□□□ -0.31
CEACAM4O75871 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.11□□□□□ -0.31
CEACAM4O75871 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM4O75871 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms