Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.24■□□□□ 0.03
LRCH4O75427 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 AC005586.2-201ENST00000563946 837 ntBASIC15.24■□□□□ 0.03
LRCH4O75427 MIR4783-201ENST00000580343 82 ntBASIC15.24■□□□□ 0.03
LRCH4O75427 AC104506.1-201ENST00000609247 429 ntBASIC15.24■□□□□ 0.03
LRCH4O75427 AL008721.1-201ENST00000609964 604 ntBASIC15.24■□□□□ 0.03
LRCH4O75427 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LRCH4O75427 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.24■□□□□ 0.03
LRCH4O75427 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LRCH4O75427 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LRCH4O75427 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LRCH4O75427 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.24■□□□□ 0.03
LRCH4O75427 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.24■□□□□ 0.03
LRCH4O75427 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH4O75427 KRT8P24-201ENST00000560290 1559 ntBASIC15.24■□□□□ 0.03
LRCH4O75427 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 BEND3P1-201ENST00000421591 1944 ntBASIC15.23■□□□□ 0.03
LRCH4O75427 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.23■□□□□ 0.03
LRCH4O75427 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 TMBIM7P-202ENST00000641474 1516 ntBASIC15.23■□□□□ 0.03
LRCH4O75427 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
LRCH4O75427 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
LRCH4O75427 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRCH4O75427 PKD1P5-201ENST00000532415 10291 ntBASIC15.23■□□□□ 0.03
LRCH4O75427 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.23■□□□□ 0.03
LRCH4O75427 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.23■□□□□ 0.03
LRCH4O75427 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.23■□□□□ 0.03
LRCH4O75427 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 ACA64.2-201ENST00000459014 129 ntBASIC15.23■□□□□ 0.03
LRCH4O75427 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.23■□□□□ 0.03
LRCH4O75427 AC100850.1-201ENST00000506768 649 ntBASIC15.23■□□□□ 0.03
LRCH4O75427 AC104989.1-201ENST00000519711 778 ntBASIC15.23■□□□□ 0.03
LRCH4O75427 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.23■□□□□ 0.03
LRCH4O75427 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.23■□□□□ 0.03
LRCH4O75427 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.23■□□□□ 0.03
LRCH4O75427 DUX4L46-201ENST00000566845 751 ntBASIC15.23■□□□□ 0.03
LRCH4O75427 AC009955.4-201ENST00000597192 544 ntBASIC15.23■□□□□ 0.03
LRCH4O75427 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.23■□□□□ 0.03
LRCH4O75427 MIR6775-201ENST00000617557 69 ntBASIC15.23■□□□□ 0.03
LRCH4O75427 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.23■□□□□ 0.03
LRCH4O75427 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LRCH4O75427 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.23■□□□□ 0.03
LRCH4O75427 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRCH4O75427 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.23■□□□□ 0.03
LRCH4O75427 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH4O75427 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
LRCH4O75427 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.22■□□□□ 0.03
LRCH4O75427 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.22■□□□□ 0.03
LRCH4O75427 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LRCH4O75427 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRCH4O75427 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
LRCH4O75427 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.22■□□□□ 0.03
LRCH4O75427 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRCH4O75427 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.22■□□□□ 0.03
LRCH4O75427 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRCH4O75427 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.22■□□□□ 0.03
LRCH4O75427 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 AL645933.1-201ENST00000440087 609 ntBASIC15.22■□□□□ 0.03
LRCH4O75427 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.22■□□□□ 0.03
LRCH4O75427 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.22■□□□□ 0.03
LRCH4O75427 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.22■□□□□ 0.03
LRCH4O75427 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.22■□□□□ 0.03
LRCH4O75427 MIR6752-201ENST00000618442 71 ntBASIC15.22■□□□□ 0.03
LRCH4O75427 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.22■□□□□ 0.03
LRCH4O75427 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms