Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ATP2A1O14983 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A1O14983 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ATP2A1O14983 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A1O14983 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A1O14983 RNA5SP359-201ENST00000364838 113 ntBASIC16.72■□□□□ 0.27
ATP2A1O14983 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A1O14983 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.72■□□□□ 0.27
ATP2A1O14983 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A1O14983 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.72■□□□□ 0.27
ATP2A1O14983 RPSAP15-201ENST00000448168 861 ntBASIC16.72■□□□□ 0.27
ATP2A1O14983 AC008267.1-201ENST00000474858 1069 ntBASIC16.72■□□□□ 0.27
ATP2A1O14983 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A1O14983 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ATP2A1O14983 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ATP2A1O14983 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
ATP2A1O14983 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.72■□□□□ 0.27
ATP2A1O14983 AC124068.2-201ENST00000569473 1109 ntBASIC16.72■□□□□ 0.27
ATP2A1O14983 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.72■□□□□ 0.27
ATP2A1O14983 AC138894.2-201ENST00000602838 371 ntBASIC16.72■□□□□ 0.27
ATP2A1O14983 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
ATP2A1O14983 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.72■□□□□ 0.27
ATP2A1O14983 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ATP2A1O14983 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A1O14983 CAP2P1-201ENST00000557743 1390 ntBASIC16.72■□□□□ 0.27
ATP2A1O14983 AC073347.1-201ENST00000421633 2643 ntBASIC16.72■□□□□ 0.27
ATP2A1O14983 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A1O14983 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ATP2A1O14983 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
ATP2A1O14983 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ATP2A1O14983 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ATP2A1O14983 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.72■□□□□ 0.27
ATP2A1O14983 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.72■□□□□ 0.27
ATP2A1O14983 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A1O14983 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A1O14983 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.72■□□□□ 0.27
ATP2A1O14983 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ATP2A1O14983 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP2A1O14983 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP2A1O14983 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ATP2A1O14983 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP2A1O14983 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP2A1O14983 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP2A1O14983 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 DUTP3-201ENST00000450025 415 ntBASIC16.71■□□□□ 0.27
ATP2A1O14983 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP2A1O14983 AC027237.1-201ENST00000560942 655 ntBASIC16.71■□□□□ 0.27
ATP2A1O14983 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP2A1O14983 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.71■□□□□ 0.27
ATP2A1O14983 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP2A1O14983 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP2A1O14983 MIR5572-201ENST00000583188 137 ntBASIC16.71■□□□□ 0.27
ATP2A1O14983 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP2A1O14983 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ATP2A1O14983 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.71■□□□□ 0.27
ATP2A1O14983 AC009560.1-201ENST00000620208 434 ntBASIC16.71■□□□□ 0.27
ATP2A1O14983 AC007718.1-201ENST00000621078 280 ntBASIC16.71■□□□□ 0.27
ATP2A1O14983 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP2A1O14983 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
ATP2A1O14983 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP2A1O14983 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP2A1O14983 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A1O14983 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP2A1O14983 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.71■□□□□ 0.26
ATP2A1O14983 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
ATP2A1O14983 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
ATP2A1O14983 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP2A1O14983 AC092978.1-202ENST00000637590 1327 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A1O14983 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ATP2A1O14983 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A1O14983 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ATP2A1O14983 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A1O14983 AC013268.4-201ENST00000637413 2228 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 AC068418.2-201ENST00000577309 3703 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms