Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHL1O00533 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CHL1O00533 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHL1O00533 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CHL1O00533 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHL1O00533 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.62■□□□□ 0.57
CHL1O00533 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.62■□□□□ 0.57
CHL1O00533 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CHL1O00533 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.62■□□□□ 0.57
CHL1O00533 AC007191.1-201ENST00000623179 2995 ntBASIC18.62■□□□□ 0.57
CHL1O00533 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHL1O00533 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHL1O00533 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 OR8T1P-201ENST00000421347 918 ntBASIC18.61■□□□□ 0.57
CHL1O00533 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CHL1O00533 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC18.61■□□□□ 0.57
CHL1O00533 AC234782.1-201ENST00000451950 919 ntBASIC18.61■□□□□ 0.57
CHL1O00533 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.61■□□□□ 0.57
CHL1O00533 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CHL1O00533 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.61■□□□□ 0.57
CHL1O00533 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHL1O00533 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CHL1O00533 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHL1O00533 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC18.6■□□□□ 0.57
CHL1O00533 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CHL1O00533 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.6■□□□□ 0.57
CHL1O00533 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.6■□□□□ 0.57
CHL1O00533 AC007952.5-201ENST00000572818 1486 ntBASIC18.6■□□□□ 0.57
CHL1O00533 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CHL1O00533 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 TBC1D3J-201ENST00000620719 1426 ntBASIC18.6■□□□□ 0.57
CHL1O00533 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 FAM90A2P-201ENST00000511144 1395 ntBASIC18.6■□□□□ 0.57
CHL1O00533 FAM90A25P-201ENST00000528404 1395 ntBASIC18.6■□□□□ 0.57
CHL1O00533 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CHL1O00533 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.6■□□□□ 0.57
CHL1O00533 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 RN7SL67P-201ENST00000492147 296 ntBASIC18.6■□□□□ 0.57
CHL1O00533 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.6■□□□□ 0.57
CHL1O00533 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.6■□□□□ 0.57
CHL1O00533 KRT8P1-201ENST00000557533 1207 ntBASIC18.6■□□□□ 0.57
CHL1O00533 MIR3677-201ENST00000578964 60 ntBASIC18.6■□□□□ 0.57
CHL1O00533 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.6■□□□□ 0.57
CHL1O00533 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CHL1O00533 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CHL1O00533 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CHL1O00533 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC18.6■□□□□ 0.57
CHL1O00533 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CHL1O00533 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHL1O00533 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.6■□□□□ 0.57
CHL1O00533 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHL1O00533 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CHL1O00533 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CHL1O00533 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHL1O00533 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHL1O00533 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.59■□□□□ 0.57
CHL1O00533 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CHL1O00533 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHL1O00533 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHL1O00533 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHL1O00533 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHL1O00533 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHL1O00533 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHL1O00533 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC18.59■□□□□ 0.57
CHL1O00533 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHL1O00533 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHL1O00533 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHL1O00533 AC091046.1-201ENST00000331871 207 ntBASIC18.59■□□□□ 0.57
CHL1O00533 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHL1O00533 MIR557-201ENST00000385239 98 ntBASIC18.59■□□□□ 0.57
CHL1O00533 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms