Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RPL13AP3-202ENST00000494676 1473 ntBASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 MST1L-204ENST00000545160 559 ntTSL 4 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 AP006248.1-201ENST00000610471 67 ntBASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 AC113385.2-201ENST00000614465 762 ntBASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 BX322562.1-201ENST00000617004 561 ntBASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 LINC00528-201ENST00000600723 2160 ntBASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 NKILA-202ENST00000614771 2598 ntBASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 KHSRPP1-201ENST00000427983 1768 ntBASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 LINC01101-201ENST00000622953 1884 ntBASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 POLR2LP1-206ENST00000444785 187 ntBASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 AC099328.1-201ENST00000498809 1030 ntBASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 GRAMD4P6-201ENST00000556999 244 ntBASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 RN7SL478P-201ENST00000584358 298 ntBASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 AC026336.4-201ENST00000624565 1050 ntBASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88BA6NKF7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TMEM88BA6NKF7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms