Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 AC051619.7-201ENST00000568314 623 ntBASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 AC004461.2-201ENST00000629517 803 ntBASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 AL513210.1-201ENST00000629608 234 ntBASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 AL591122.2-201ENST00000624125 1853 ntBASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.65□□□□□ -0.38
MEIS3P1A6NDR6 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
MEIS3P1A6NDR6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
MEIS3P1A6NDR6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.65□□□□□ -0.39
MEIS3P1A6NDR6 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 STRCP1-201ENST00000509801 5328 ntBASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 PCDHB18P-202ENST00000526308 3197 ntBASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 LINC02486-201ENST00000604157 3000 ntBASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 RN7SL618P-201ENST00000477850 296 ntBASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 AC010336.2-201ENST00000564226 506 ntBASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 AC215219.1-201ENST00000400706 1817 ntBASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MEIS3P1A6NDR6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 AC093525.8-201ENST00000624099 1342 ntBASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 AC011840.2-201ENST00000563063 1520 ntBASIC12.63□□□□□ -0.39
MEIS3P1A6NDR6 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms