Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 INE2-201ENST00000630399 1874 ntBASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 AC012617.1-204ENST00000586340 2305 ntBASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RHBDD3Q9Y3P4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 AL137784.3-201ENST00000623858 2288 ntBASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 KRT8P35-201ENST00000483942 1338 ntBASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 ACTBP8-201ENST00000403258 1108 ntBASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 TMEM198B-204ENST00000484016 896 ntBASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 AC009486.1-201ENST00000569860 813 ntBASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RHBDD3Q9Y3P4 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms