Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 MIR557-201ENST00000385239 98 ntBASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 BAX-205ENST00000391871 687 ntTSL 5 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 BANF1P3-201ENST00000412556 261 ntBASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 PARVG-202ENST00000415224 999 ntTSL 2 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 PPP1R2P4-201ENST00000424051 595 ntBASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 AC012618.1-201ENST00000461223 412 ntBASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 IRF3-215ENST00000596822 823 ntTSL 3 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 AC097724.1-201ENST00000609581 426 ntBASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 USP39-207ENST00000450066 2086 ntTSL 2 BASIC19.4■□□□□ 0.7
NPC1L1Q9UHC9 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NPC1L1Q9UHC9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NPC1L1Q9UHC9 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NPC1L1Q9UHC9 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NPC1L1Q9UHC9 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NPC1L1Q9UHC9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NPC1L1Q9UHC9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 AC007274.2-201ENST00000421675 662 ntBASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 IGHJ2P-201ENST00000454480 60 ntBASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 TMEM198B-204ENST00000484016 896 ntBASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 GOLGA2P8-201ENST00000505201 779 ntBASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 AC026803.1-201ENST00000569130 274 ntBASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 AL109837.1-201ENST00000603272 613 ntBASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
NPC1L1Q9UHC9 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 AL662890.1-201ENST00000396818 632 ntBASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 HMGA1P1-201ENST00000415560 1062 ntBASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 RPSAP15-201ENST00000448168 861 ntBASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.38■□□□□ 0.69
NPC1L1Q9UHC9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms