Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLN8Q9UBY8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.5□□□□□ -0.41
CLN8Q9UBY8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CLN8Q9UBY8 AC018529.2-202ENST00000611482 3087 ntBASIC12.5□□□□□ -0.41
CLN8Q9UBY8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
CLN8Q9UBY8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLN8Q9UBY8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CLN8Q9UBY8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CLN8Q9UBY8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLN8Q9UBY8 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLN8Q9UBY8 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 TUBB1P2-201ENST00000422712 1306 ntBASIC12.49□□□□□ -0.41
CLN8Q9UBY8 CLUHP2-201ENST00000426660 1303 ntBASIC12.49□□□□□ -0.41
CLN8Q9UBY8 TUBB1P1-201ENST00000503144 1300 ntBASIC12.49□□□□□ -0.41
CLN8Q9UBY8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 AL033527.4-201ENST00000641026 673 ntBASIC12.49□□□□□ -0.41
CLN8Q9UBY8 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 AC097359.2-201ENST00000604992 2389 ntBASIC12.49□□□□□ -0.41
CLN8Q9UBY8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CLN8Q9UBY8 AC023090.2-201ENST00000625182 2110 ntBASIC12.49□□□□□ -0.41
CLN8Q9UBY8 BX640514.1-201ENST00000583223 1918 ntBASIC12.49□□□□□ -0.41
CLN8Q9UBY8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 AC079781.5-202ENST00000641784 3743 ntBASIC12.48□□□□□ -0.41
CLN8Q9UBY8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 FKBP4P6-201ENST00000457486 1332 ntBASIC12.48□□□□□ -0.41
CLN8Q9UBY8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 MESTP3-201ENST00000503460 968 ntBASIC12.48□□□□□ -0.41
CLN8Q9UBY8 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.48□□□□□ -0.41
CLN8Q9UBY8 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN8Q9UBY8 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms