Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 AC016700.1-201ENST00000429424 312 ntBASIC14.68□□□□□ -0.06
SPASTQ9UBP0 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 AC106872.11-201ENST00000605838 421 ntBASIC14.68□□□□□ -0.06
SPASTQ9UBP0 AL358472.3-201ENST00000608147 415 ntBASIC14.68□□□□□ -0.06
SPASTQ9UBP0 AL021578.1-201ENST00000613646 709 ntBASIC14.68□□□□□ -0.06
SPASTQ9UBP0 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 AC013726.1-201ENST00000563747 2285 ntBASIC14.68□□□□□ -0.06
SPASTQ9UBP0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPASTQ9UBP0 AL359258.3-201ENST00000622910 2331 ntBASIC14.67□□□□□ -0.06
SPASTQ9UBP0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 AC100827.2-201ENST00000563214 1194 ntBASIC14.67□□□□□ -0.06
SPASTQ9UBP0 RN7SL163P-201ENST00000583100 276 ntBASIC14.67□□□□□ -0.06
SPASTQ9UBP0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 AJ011931.1-201ENST00000618749 2492 ntBASIC14.67□□□□□ -0.06
SPASTQ9UBP0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.67□□□□□ -0.06
SPASTQ9UBP0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 GRK6P1-201ENST00000400595 1711 ntBASIC14.66□□□□□ -0.06
SPASTQ9UBP0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPASTQ9UBP0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms