Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AC019193.1-201ENST00000506678 823 ntBASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 AC026803.1-201ENST00000569130 274 ntBASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 MIR3188-201ENST00000583494 85 ntBASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 AL109837.1-201ENST00000603272 613 ntBASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT1Q9P2V4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 LINC02228-204ENST00000642115 2962 ntBASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 FAM90A2P-201ENST00000511144 1395 ntBASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 FAM90A25P-201ENST00000528404 1395 ntBASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 AL627231.1-201ENST00000394467 1125 ntBASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 KRT18P36-201ENST00000411618 1276 ntBASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 AC026320.2-201ENST00000434379 478 ntBASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 SPCS2P2-201ENST00000603270 608 ntBASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 LINC01783-202ENST00000614408 828 ntBASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 BX284668.2-205ENST00000619677 828 ntBASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 AC006504.5-208ENST00000588784 2401 ntBASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 AC015909.3-201ENST00000572855 1794 ntBASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT1Q9P2V4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 AC015688.4-201ENST00000580780 1647 ntBASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 MYO15B-237ENST00000642007 4893 ntBASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 OR2K2-202ENST00000374428 1038 ntBASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT1Q9P2V4 TSPY25P-201ENST00000429463 745 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms