Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 AC078875.1-201ENST00000431907 724 ntBASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 RN7SL11P-201ENST00000471305 293 ntBASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 RCC2P8-201ENST00000502779 1035 ntBASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 RBM8B-201ENST00000555532 525 ntBASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 MYO15B-237ENST00000642007 4893 ntBASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 AC009093.10-201ENST00000641956 1442 ntBASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 AC097724.1-201ENST00000609581 426 ntBASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 AC133540.1-201ENST00000620845 1019 ntBASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.79■□□□□ 0.44
HMG20BQ9P0W2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 AL157791.1-201ENST00000553667 1699 ntBASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 AL662890.1-201ENST00000396818 632 ntBASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 AC024681.1-201ENST00000521917 487 ntBASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms