Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 AC103988.2-201ENST00000561804 725 ntBASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 BNIP3P13-201ENST00000599968 566 ntBASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 AC022748.3-201ENST00000621828 275 ntBASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 AL359183.1-201ENST00000623796 2132 ntBASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP6V0A4Q9HBG4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 KRT8P28-201ENST00000433288 1390 ntBASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 KLF2P1-201ENST00000447438 1042 ntBASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 AC015688.4-201ENST00000580780 1647 ntBASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 AL008718.2-201ENST00000609206 1313 ntBASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 AC005252.3-201ENST00000623855 2258 ntBASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
ATP6V0A4Q9HBG4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 AL354702.1-201ENST00000442006 1960 ntBASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 ELK2AP-201ENST00000392510 1007 ntBASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 AC106794.1-201ENST00000506935 792 ntBASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 AC079328.1-201ENST00000560358 952 ntBASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 AC005324.6-201ENST00000587972 613 ntBASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 AC009884.2-201ENST00000603110 324 ntBASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 CU633904.3-201ENST00000624042 1029 ntBASIC16.31■□□□□ 0.2
ATP6V0A4Q9HBG4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms