Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 AC097359.3-201ENST00000603982 1210 ntBASIC11.94□□□□□ -0.5
NKX6-2Q9C056 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 TP73-AS1-207ENST00000624167 988 ntBASIC11.94□□□□□ -0.5
NKX6-2Q9C056 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 AC090643.2-201ENST00000623442 2029 ntBASIC11.94□□□□□ -0.5
NKX6-2Q9C056 AC012508.2-201ENST00000567613 1472 ntBASIC11.94□□□□□ -0.5
NKX6-2Q9C056 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 PCDHA6-201ENST00000378126 3267 ntBASIC11.94□□□□□ -0.5
NKX6-2Q9C056 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 AL645937.6-201ENST00000641122 3727 ntBASIC11.94□□□□□ -0.5
NKX6-2Q9C056 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX6-2Q9C056 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 UBTFL8-201ENST00000426903 2112 ntBASIC11.93□□□□□ -0.5
NKX6-2Q9C056 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 AC108751.1-201ENST00000490852 363 ntBASIC11.93□□□□□ -0.5
NKX6-2Q9C056 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 LINC00638-201ENST00000555578 2518 ntBASIC11.93□□□□□ -0.5
NKX6-2Q9C056 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.93□□□□□ -0.5
NKX6-2Q9C056 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 CYP4F24P-201ENST00000586049 1580 ntBASIC11.92□□□□□ -0.5
NKX6-2Q9C056 AP3S2-216ENST00000617003 1561 ntBASIC11.92□□□□□ -0.5
NKX6-2Q9C056 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX6-2Q9C056 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms