Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 AC010141.1-201ENST00000411585 623 ntBASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 GUSBP10-201ENST00000417412 665 ntBASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 IGHEP2-201ENST00000519308 1256 ntBASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 AC022966.2-201ENST00000587434 367 ntBASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 AC004466.1-201ENST00000599515 1080 ntBASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 LINC01165-201ENST00000445190 1623 ntBASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNTNAP3Q9BZ76 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 AP000593.2-201ENST00000542775 1433 ntBASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 AL645937.2-201ENST00000396808 931 ntBASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 AC114947.1-202ENST00000514136 344 ntBASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 AC138701.2-201ENST00000553634 226 ntBASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 DERL2-206ENST00000572834 589 ntTSL 3 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 AC007952.4-201ENST00000573866 637 ntBASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 HNRNPA1P16-201ENST00000575692 955 ntBASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 EEF1DP7-201ENST00000580496 513 ntBASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 RN7SL357P-201ENST00000581065 298 ntBASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 AC009884.2-201ENST00000603110 324 ntBASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 TMEM14EP-202ENST00000639378 1296 ntBASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CNTNAP3Q9BZ76 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms