Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 AP000842.3-202ENST00000569238 1080 ntBASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 AC148477.8-201ENST00000624298 468 ntBASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 FAM215A-202ENST00000632077 792 ntBASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 AP3S2-216ENST00000617003 1561 ntBASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SEC22CQ9BRL7 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 AC112191.1-201ENST00000523689 701 ntBASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC22CQ9BRL7 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 POM121L14P-201ENST00000406100 1558 ntBASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SEC22CQ9BRL7 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SEC22CQ9BRL7 MIR346-201ENST00000362234 95 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms