Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.46□□□□□ -0.09
NPAS2Q99743 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.46□□□□□ -0.09
NPAS2Q99743 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 AC007389.4-201ENST00000454674 793 ntBASIC14.46□□□□□ -0.09
NPAS2Q99743 GPR53P-205ENST00000457298 1084 ntBASIC14.46□□□□□ -0.09
NPAS2Q99743 KRT17P8-201ENST00000540749 863 ntBASIC14.46□□□□□ -0.09
NPAS2Q99743 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.46□□□□□ -0.09
NPAS2Q99743 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.46□□□□□ -0.09
NPAS2Q99743 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.46□□□□□ -0.09
NPAS2Q99743 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.46□□□□□ -0.09
NPAS2Q99743 AC106886.1-201ENST00000568660 600 ntBASIC14.46□□□□□ -0.09
NPAS2Q99743 AL049840.4-201ENST00000602422 811 ntBASIC14.46□□□□□ -0.09
NPAS2Q99743 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.46□□□□□ -0.09
NPAS2Q99743 AL008721.1-201ENST00000609964 604 ntBASIC14.46□□□□□ -0.09
NPAS2Q99743 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.46□□□□□ -0.09
NPAS2Q99743 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.46□□□□□ -0.09
NPAS2Q99743 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.46□□□□□ -0.09
NPAS2Q99743 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NPAS2Q99743 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.46□□□□□ -0.09
NPAS2Q99743 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPAS2Q99743 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPAS2Q99743 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
NPAS2Q99743 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPAS2Q99743 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPAS2Q99743 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.46□□□□□ -0.1
NPAS2Q99743 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPAS2Q99743 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.46□□□□□ -0.1
NPAS2Q99743 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
NPAS2Q99743 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.46□□□□□ -0.1
NPAS2Q99743 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NPAS2Q99743 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.45□□□□□ -0.1
NPAS2Q99743 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 TCAF1P1-201ENST00000414990 2232 ntBASIC14.45□□□□□ -0.1
NPAS2Q99743 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NPAS2Q99743 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.45□□□□□ -0.1
NPAS2Q99743 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NPAS2Q99743 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NPAS2Q99743 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.45□□□□□ -0.1
NPAS2Q99743 ATP5G2P4-201ENST00000442175 420 ntBASIC14.45□□□□□ -0.1
NPAS2Q99743 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 ACA64.2-201ENST00000459014 129 ntBASIC14.45□□□□□ -0.1
NPAS2Q99743 VDAC1P7-201ENST00000462417 847 ntBASIC14.45□□□□□ -0.1
NPAS2Q99743 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.45□□□□□ -0.1
NPAS2Q99743 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.45□□□□□ -0.1
NPAS2Q99743 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.45□□□□□ -0.1
NPAS2Q99743 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.45□□□□□ -0.1
NPAS2Q99743 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NPAS2Q99743 IGHV3-71-201ENST00000523324 359 ntBASIC14.45□□□□□ -0.1
NPAS2Q99743 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.45□□□□□ -0.1
NPAS2Q99743 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.45□□□□□ -0.1
NPAS2Q99743 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.45□□□□□ -0.1
NPAS2Q99743 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.45□□□□□ -0.1
NPAS2Q99743 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
NPAS2Q99743 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NPAS2Q99743 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NPAS2Q99743 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPAS2Q99743 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.45□□□□□ -0.1
NPAS2Q99743 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NPAS2Q99743 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 INTS4P2-202ENST00000614726 2019 ntBASIC14.44□□□□□ -0.1
NPAS2Q99743 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPAS2Q99743 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms