Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 AL512310.5-201ENST00000551999 515 ntBASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP2Q96SN8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CDK5RAP2Q96SN8 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.83■□□□□ 0.29
CDK5RAP2Q96SN8 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CDK5RAP2Q96SN8 AC006372.4-201ENST00000624122 1543 ntBASIC16.83■□□□□ 0.29
CDK5RAP2Q96SN8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDK5RAP2Q96SN8 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CDK5RAP2Q96SN8 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 AL355334.1-201ENST00000417713 215 ntBASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.83■□□□□ 0.28
CDK5RAP2Q96SN8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 AC108734.2-201ENST00000420887 1069 ntBASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 AC092638.2-201ENST00000441105 947 ntBASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 RPL7P35-201ENST00000446943 740 ntBASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 LYPLA2P1-203ENST00000447689 696 ntBASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 AC018463.1-201ENST00000456674 917 ntBASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 TRMT112P3-201ENST00000580149 358 ntBASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 AC103810.10-201ENST00000606504 343 ntBASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 AC015909.5-201ENST00000624336 2266 ntBASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms