Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 AC108734.2-201ENST00000420887 1069 ntBASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 KLF17P1-201ENST00000547105 1126 ntBASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 KRT8P2-201ENST00000556193 944 ntBASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 AGAP7P-201ENST00000582299 2062 ntBASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 AGAP14-201ENST00000624701 2060 ntBASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRAMP1Q96RY5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 KRT17P4-201ENST00000429445 819 ntBASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 GRPEL2P1-201ENST00000453145 339 ntBASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 MIR6746-201ENST00000620971 63 ntBASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 AC064801.2-201ENST00000625052 1303 ntBASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CRAMP1Q96RY5 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 AL118516.1-201ENST00000564152 670 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms