Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL21A1Q96P44 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL21A1Q96P44 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL21A1Q96P44 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL21A1Q96P44 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL21A1Q96P44 AC107918.4-201ENST00000641966 3141 ntBASIC13.96□□□□□ -0.17
COL21A1Q96P44 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL21A1Q96P44 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL21A1Q96P44 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL21A1Q96P44 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL21A1Q96P44 EIF3FP3-201ENST00000434851 1086 ntBASIC13.96□□□□□ -0.17
COL21A1Q96P44 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 DUX4L47-201ENST00000566374 394 ntBASIC13.96□□□□□ -0.17
COL21A1Q96P44 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL21A1Q96P44 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL21A1Q96P44 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL21A1Q96P44 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
COL21A1Q96P44 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.96□□□□□ -0.18
COL21A1Q96P44 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
COL21A1Q96P44 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
COL21A1Q96P44 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
COL21A1Q96P44 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
COL21A1Q96P44 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
COL21A1Q96P44 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
COL21A1Q96P44 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.96□□□□□ -0.18
COL21A1Q96P44 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
COL21A1Q96P44 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.96□□□□□ -0.18
COL21A1Q96P44 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
COL21A1Q96P44 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 C2orf27AP3-201ENST00000434123 579 ntBASIC13.95□□□□□ -0.18
COL21A1Q96P44 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 AL354718.3-201ENST00000616414 581 ntBASIC13.95□□□□□ -0.18
COL21A1Q96P44 CR382287.1-201ENST00000623954 586 ntBASIC13.95□□□□□ -0.18
COL21A1Q96P44 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 AGGF1P1-201ENST00000509500 2073 ntBASIC13.95□□□□□ -0.18
COL21A1Q96P44 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
COL21A1Q96P44 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL21A1Q96P44 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL21A1Q96P44 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms