Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.78■□□□□ 0.12
SNX27Q96L92 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SNX27Q96L92 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.78■□□□□ 0.12
SNX27Q96L92 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.78■□□□□ 0.12
SNX27Q96L92 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.78■□□□□ 0.12
SNX27Q96L92 ISCA2P1-201ENST00000425548 448 ntBASIC15.78■□□□□ 0.12
SNX27Q96L92 OR2R1P-201ENST00000441404 914 ntBASIC15.78■□□□□ 0.12
SNX27Q96L92 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.78■□□□□ 0.12
SNX27Q96L92 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
SNX27Q96L92 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.78■□□□□ 0.12
SNX27Q96L92 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.78■□□□□ 0.12
SNX27Q96L92 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.78■□□□□ 0.12
SNX27Q96L92 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.78■□□□□ 0.12
SNX27Q96L92 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.78■□□□□ 0.12
SNX27Q96L92 AC092299.1-201ENST00000632679 757 ntBASIC15.78■□□□□ 0.12
SNX27Q96L92 NAP1L6-202ENST00000641404 1222 ntBASIC15.78■□□□□ 0.12
SNX27Q96L92 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNX27Q96L92 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.78■□□□□ 0.12
SNX27Q96L92 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNX27Q96L92 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNX27Q96L92 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNX27Q96L92 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNX27Q96L92 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SNX27Q96L92 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SNX27Q96L92 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNX27Q96L92 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.77■□□□□ 0.12
SNX27Q96L92 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
SNX27Q96L92 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNX27Q96L92 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.77■□□□□ 0.12
SNX27Q96L92 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNX27Q96L92 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNX27Q96L92 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.77■□□□□ 0.12
SNX27Q96L92 AL139008.1-201ENST00000437894 228 ntBASIC15.77■□□□□ 0.12
SNX27Q96L92 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.77■□□□□ 0.12
SNX27Q96L92 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.77■□□□□ 0.12
SNX27Q96L92 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC15.77■□□□□ 0.12
SNX27Q96L92 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.77■□□□□ 0.12
SNX27Q96L92 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.77■□□□□ 0.12
SNX27Q96L92 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNX27Q96L92 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.77■□□□□ 0.12
SNX27Q96L92 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.77■□□□□ 0.12
SNX27Q96L92 RN7SL596P-201ENST00000582123 288 ntBASIC15.77■□□□□ 0.12
SNX27Q96L92 AC018695.6-201ENST00000614011 534 ntBASIC15.77■□□□□ 0.12
SNX27Q96L92 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SNX27Q96L92 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNX27Q96L92 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNX27Q96L92 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SNX27Q96L92 KRT8P21-201ENST00000430398 1491 ntBASIC15.77■□□□□ 0.11
SNX27Q96L92 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.77■□□□□ 0.11
SNX27Q96L92 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.77■□□□□ 0.11
SNX27Q96L92 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.77■□□□□ 0.11
SNX27Q96L92 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
SNX27Q96L92 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SNX27Q96L92 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNX27Q96L92 FER1L4-210ENST00000615531 5998 ntBASIC15.77■□□□□ 0.11
SNX27Q96L92 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.77■□□□□ 0.11
SNX27Q96L92 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNX27Q96L92 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.76■□□□□ 0.11
SNX27Q96L92 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.76■□□□□ 0.11
SNX27Q96L92 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNX27Q96L92 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNX27Q96L92 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNX27Q96L92 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNX27Q96L92 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNX27Q96L92 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNX27Q96L92 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNX27Q96L92 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.76■□□□□ 0.11
SNX27Q96L92 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
SNX27Q96L92 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNX27Q96L92 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
SNX27Q96L92 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
SNX27Q96L92 JPT2-203ENST00000382711 894 ntTSL 4 BASIC15.76■□□□□ 0.11
SNX27Q96L92 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.76■□□□□ 0.11
SNX27Q96L92 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.76■□□□□ 0.11
SNX27Q96L92 Z97180.1-201ENST00000445173 988 ntBASIC15.76■□□□□ 0.11
SNX27Q96L92 AC090857.1-201ENST00000527400 390 ntBASIC15.76■□□□□ 0.11
SNX27Q96L92 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.76■□□□□ 0.11
SNX27Q96L92 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.76■□□□□ 0.11
SNX27Q96L92 AL161670.2-201ENST00000557650 1227 ntBASIC15.76■□□□□ 0.11
SNX27Q96L92 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SNX27Q96L92 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.76■□□□□ 0.11
SNX27Q96L92 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.76■□□□□ 0.11
SNX27Q96L92 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNX27Q96L92 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNX27Q96L92 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNX27Q96L92 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNX27Q96L92 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNX27Q96L92 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms