Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 AC136621.1-201ENST00000624017 2304 ntBASIC16.84■□□□□ 0.29
CDCA5Q96FF9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
CDCA5Q96FF9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.83■□□□□ 0.29
CDCA5Q96FF9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDCA5Q96FF9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.83■□□□□ 0.29
CDCA5Q96FF9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.83■□□□□ 0.29
CDCA5Q96FF9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 PCDHA1-201ENST00000378133 2726 ntBASIC16.83■□□□□ 0.28
CDCA5Q96FF9 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 AC023141.7-201ENST00000430646 407 ntBASIC16.83■□□□□ 0.28
CDCA5Q96FF9 ASS1P2-201ENST00000439895 1223 ntBASIC16.83■□□□□ 0.28
CDCA5Q96FF9 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 EEF1GP8-201ENST00000506566 1154 ntBASIC16.83■□□□□ 0.28
CDCA5Q96FF9 RN7SKP155-201ENST00000516031 288 ntBASIC16.83■□□□□ 0.28
CDCA5Q96FF9 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 FTLP5-201ENST00000586853 534 ntBASIC16.83■□□□□ 0.28
CDCA5Q96FF9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.83■□□□□ 0.28
CDCA5Q96FF9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 BX679664.3-201ENST00000414070 555 ntBASIC16.82■□□□□ 0.28
CDCA5Q96FF9 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 KRT18P4-201ENST00000422599 1288 ntBASIC16.82■□□□□ 0.28
CDCA5Q96FF9 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 RNLS-203ENST00000437752 525 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 AC113935.1-201ENST00000471722 555 ntBASIC16.82■□□□□ 0.28
CDCA5Q96FF9 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 AL132994.1-201ENST00000554098 400 ntBASIC16.82■□□□□ 0.28
CDCA5Q96FF9 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC16.82■□□□□ 0.28
CDCA5Q96FF9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 ACE3P-201ENST00000423435 1973 ntBASIC16.82■□□□□ 0.28
CDCA5Q96FF9 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDCA5Q96FF9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA5Q96FF9 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.81■□□□□ 0.28
CDCA5Q96FF9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA5Q96FF9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDCA5Q96FF9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CDCA5Q96FF9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA5Q96FF9 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.81■□□□□ 0.28
CDCA5Q96FF9 KRT8P18-201ENST00000413425 1445 ntBASIC16.81■□□□□ 0.28
CDCA5Q96FF9 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.81■□□□□ 0.28
CDCA5Q96FF9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDCA5Q96FF9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA5Q96FF9 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA5Q96FF9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDCA5Q96FF9 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms