Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 HSPA8P5-201ENST00000456928 2069 ntBASIC14.19□□□□□ -0.14
VPS33AQ96AX1 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 AC023794.5-201ENST00000564380 2157 ntBASIC14.18□□□□□ -0.14
VPS33AQ96AX1 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 TMEM198B-204ENST00000484016 896 ntBASIC14.18□□□□□ -0.14
VPS33AQ96AX1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 DOC2GP-202ENST00000514950 1163 ntBASIC14.18□□□□□ -0.14
VPS33AQ96AX1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 AC120045.2-201ENST00000567334 178 ntBASIC14.18□□□□□ -0.14
VPS33AQ96AX1 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 AC007431.3-201ENST00000623221 587 ntBASIC14.18□□□□□ -0.14
VPS33AQ96AX1 AC011840.2-201ENST00000563063 1520 ntBASIC14.18□□□□□ -0.14
VPS33AQ96AX1 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 INTS4P2-202ENST00000614726 2019 ntBASIC14.18□□□□□ -0.14
VPS33AQ96AX1 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 AC015688.4-201ENST00000580780 1647 ntBASIC14.18□□□□□ -0.14
VPS33AQ96AX1 AC111170.3-201ENST00000624282 2464 ntBASIC14.18□□□□□ -0.14
VPS33AQ96AX1 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS33AQ96AX1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 FAM90A12P-201ENST00000519497 2375 ntBASIC14.17□□□□□ -0.14
VPS33AQ96AX1 FAM90A24P-201ENST00000520792 2369 ntBASIC14.17□□□□□ -0.14
VPS33AQ96AX1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 EIF3FP3-201ENST00000434851 1086 ntBASIC14.17□□□□□ -0.14
VPS33AQ96AX1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 AC138761.1-201ENST00000584393 385 ntBASIC14.17□□□□□ -0.14
VPS33AQ96AX1 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS33AQ96AX1 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms