Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 POM121L10P-201ENST00000436994 1285 ntBASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 MESTP3-201ENST00000503460 968 ntBASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 AC026434.2-201ENST00000506094 1078 ntBASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDND2Q8NHS1 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 REXO1L4P-201ENST00000605109 1937 ntBASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 CALR4P-201ENST00000431943 946 ntBASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 HIST2H2BB-201ENST00000449108 381 ntBASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 AC091804.1-201ENST00000486888 567 ntBASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CLDND2Q8NHS1 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms