Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 AC064836.3-201ENST00000607928 673 ntBASIC11.02□□□□□ -0.65
NUP35Q8NFH5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NUP35Q8NFH5 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 AL031719.1-201ENST00000623365 2587 ntBASIC11.01□□□□□ -0.65
NUP35Q8NFH5 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 TOMM22P5-201ENST00000416399 439 ntBASIC11.01□□□□□ -0.65
NUP35Q8NFH5 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 KRT18P2-201ENST00000447938 1258 ntBASIC11.01□□□□□ -0.65
NUP35Q8NFH5 SPDYE11-202ENST00000450699 704 ntBASIC11.01□□□□□ -0.65
NUP35Q8NFH5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 SLC25A39P2-201ENST00000537614 270 ntBASIC11.01□□□□□ -0.65
NUP35Q8NFH5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 SPDYE9P-201ENST00000570642 692 ntBASIC11.01□□□□□ -0.65
NUP35Q8NFH5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 SPDYE10P-202ENST00000612005 668 ntBASIC11.01□□□□□ -0.65
NUP35Q8NFH5 SPDYE8P-202ENST00000612377 668 ntBASIC11.01□□□□□ -0.65
NUP35Q8NFH5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 TUBB8P4-201ENST00000511806 1324 ntBASIC11.01□□□□□ -0.65
NUP35Q8NFH5 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
NUP35Q8NFH5 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms