Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AL513523.2-202ENST00000427283 2040 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AL023775.1-201ENST00000454907 1746 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 MIR33B-201ENST00000385104 96 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AL645939.5-201ENST00000606834 243 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 CU633904.3-201ENST00000624042 1029 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 MIR6727-201ENST00000620702 65 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 LGALS8-206ENST00000366584 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 TTYH2-201ENST00000269346 3490 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 YBX1P6-201ENST00000442962 1002 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AC015967.2-201ENST00000624092 234 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AC006435.4-201ENST00000625037 234 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AL356737.1-201ENST00000634391 234 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AC084364.1-201ENST00000551967 1556 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 BAATP1-201ENST00000412284 1225 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 MPRIPP1-201ENST00000452433 1089 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 CEP164P1-201ENST00000455142 418 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AP005019.2-201ENST00000615104 511 ntBASIC4.59□□□□□ -1.67
SYNE1Q8NF91 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 L3MBTL3-207ENST00000529410 4518 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNE1Q8NF91 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SYNE1Q8NF91 RBM7-203ENST00000540163 4243 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
SYNE1Q8NF91 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SYNE1Q8NF91 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms