Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 AL591122.2-201ENST00000624125 1853 ntBASIC14.37□□□□□ -0.11
HIPK4Q8NE63 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIPK4Q8NE63 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 AC211486.1-202ENST00000416371 468 ntBASIC14.36□□□□□ -0.11
HIPK4Q8NE63 UPF3AP3-201ENST00000420996 769 ntBASIC14.36□□□□□ -0.11
HIPK4Q8NE63 BX842568.4-201ENST00000421222 227 ntBASIC14.36□□□□□ -0.11
HIPK4Q8NE63 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 AC211476.1-201ENST00000503899 468 ntBASIC14.36□□□□□ -0.11
HIPK4Q8NE63 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 AC069262.1-201ENST00000539058 672 ntBASIC14.36□□□□□ -0.11
HIPK4Q8NE63 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 LINC01115-203ENST00000606068 577 ntBASIC14.36□□□□□ -0.11
HIPK4Q8NE63 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIPK4Q8NE63 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 PCDHB18P-202ENST00000526308 3197 ntBASIC14.35□□□□□ -0.11
HIPK4Q8NE63 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 AC068760.1-201ENST00000493579 1953 ntBASIC14.35□□□□□ -0.11
HIPK4Q8NE63 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 AC254562.1-201ENST00000417586 456 ntBASIC14.35□□□□□ -0.11
HIPK4Q8NE63 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 RN7SL618P-201ENST00000477850 296 ntBASIC14.35□□□□□ -0.11
HIPK4Q8NE63 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.35□□□□□ -0.11
HIPK4Q8NE63 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms