Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AC008723.1-201ENST00000506922 207 ntBASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 AC242376.2-201ENST00000619355 883 ntBASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 C18orf15-201ENST00000623680 2534 ntBASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 AC144831.1-201ENST00000573312 2656 ntBASIC14.08□□□□□ -0.16
ZNF248Q8NDW4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 AC126365.1-201ENST00000578585 1514 ntBASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 MIR1227-201ENST00000408484 88 ntBASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 VDAC1P1-201ENST00000439229 848 ntBASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 MIR4649-201ENST00000582839 64 ntBASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 AC009884.2-201ENST00000603110 324 ntBASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 MIR6756-201ENST00000616240 63 ntBASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 TCAF2P1-201ENST00000291129 2421 ntBASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 AL008718.2-201ENST00000609206 1313 ntBASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF248Q8NDW4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 AC009090.5-201ENST00000624886 2285 ntBASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 AC112693.3-201ENST00000624819 1983 ntBASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 KRT18P66-201ENST00000452970 1269 ntBASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 AC005357.2-202ENST00000590507 1060 ntBASIC14.06□□□□□ -0.16
ZNF248Q8NDW4 AC008825.2-201ENST00000603374 718 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms