Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTTNQ86VV8 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTTNQ86VV8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RTTNQ86VV8 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTTNQ86VV8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RTTNQ86VV8 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RTTNQ86VV8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RTTNQ86VV8 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RTTNQ86VV8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.08□□□□□ -0.32
RTTNQ86VV8 KRT43P-201ENST00000434019 910 ntBASIC13.08□□□□□ -0.32
RTTNQ86VV8 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
RTTNQ86VV8 FTLP1-201ENST00000449155 526 ntBASIC13.08□□□□□ -0.32
RTTNQ86VV8 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RTTNQ86VV8 MESTP3-201ENST00000503460 968 ntBASIC13.08□□□□□ -0.32
RTTNQ86VV8 AC106760.1-201ENST00000508690 800 ntBASIC13.08□□□□□ -0.32
RTTNQ86VV8 KRT18P25-201ENST00000508931 1278 ntBASIC13.08□□□□□ -0.32
RTTNQ86VV8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.08□□□□□ -0.32
RTTNQ86VV8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.08□□□□□ -0.32
RTTNQ86VV8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.08□□□□□ -0.32
RTTNQ86VV8 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.08□□□□□ -0.32
RTTNQ86VV8 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RTTNQ86VV8 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.08□□□□□ -0.32
RTTNQ86VV8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.08□□□□□ -0.32
RTTNQ86VV8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTTNQ86VV8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTTNQ86VV8 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTTNQ86VV8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
RTTNQ86VV8 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTTNQ86VV8 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTTNQ86VV8 AC113367.3-201ENST00000508316 1912 ntBASIC13.08□□□□□ -0.32
RTTNQ86VV8 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 AL355334.1-201ENST00000417713 215 ntBASIC13.07□□□□□ -0.32
RTTNQ86VV8 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 UPF3AP2-201ENST00000457924 1132 ntBASIC13.07□□□□□ -0.32
RTTNQ86VV8 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 AL022328.3-201ENST00000607943 679 ntBASIC13.07□□□□□ -0.32
RTTNQ86VV8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 AC092978.1-202ENST00000637590 1327 ntBASIC13.07□□□□□ -0.32
RTTNQ86VV8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 KRT8P19-201ENST00000551916 1455 ntBASIC13.07□□□□□ -0.32
RTTNQ86VV8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RTTNQ86VV8 AC016694.1-201ENST00000434179 700 ntBASIC13.07□□□□□ -0.32
RTTNQ86VV8 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.07□□□□□ -0.32
RTTNQ86VV8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms