Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 KHSRPP1-201ENST00000427983 1768 ntBASIC11.14□□□□□ -0.63
MRPL54Q6P161 AC106818.1-201ENST00000623223 3242 ntBASIC11.14□□□□□ -0.63
MRPL54Q6P161 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 AKR1C7P-201ENST00000305623 895 ntBASIC11.14□□□□□ -0.63
MRPL54Q6P161 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 HLA-H-201ENST00000383620 1096 ntBASIC11.14□□□□□ -0.63
MRPL54Q6P161 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 AC142381.1-201ENST00000426099 345 ntBASIC11.14□□□□□ -0.63
MRPL54Q6P161 TARDBPP1-201ENST00000442013 1203 ntBASIC11.14□□□□□ -0.63
MRPL54Q6P161 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 RNPS1P1-201ENST00000507437 918 ntBASIC11.14□□□□□ -0.63
MRPL54Q6P161 AF238378.1-201ENST00000526806 358 ntBASIC11.14□□□□□ -0.63
MRPL54Q6P161 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 IFNL4P1-201ENST00000607083 540 ntBASIC11.14□□□□□ -0.63
MRPL54Q6P161 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.14□□□□□ -0.63
MRPL54Q6P161 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 AL360270.3-201ENST00000609118 1348 ntBASIC11.13□□□□□ -0.63
MRPL54Q6P161 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 AL133267.1-201ENST00000398220 340 ntBASIC11.13□□□□□ -0.63
MRPL54Q6P161 TMPOP1-202ENST00000424642 1267 ntBASIC11.13□□□□□ -0.63
MRPL54Q6P161 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 SLED1-202ENST00000512051 380 ntBASIC11.13□□□□□ -0.63
MRPL54Q6P161 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 SAMD11P1-201ENST00000571429 661 ntBASIC11.13□□□□□ -0.63
MRPL54Q6P161 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 AC125807.2-201ENST00000513358 3514 ntBASIC11.13□□□□□ -0.63
MRPL54Q6P161 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
MRPL54Q6P161 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.13□□□□□ -0.63
MRPL54Q6P161 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms