Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 HIST2H2BB-201ENST00000449108 381 ntBASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 AC092658.1-201ENST00000505836 891 ntBASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 GCOM2-201ENST00000509133 1104 ntBASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 AC008825.2-201ENST00000603374 718 ntBASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TTC39BQ5VTQ0 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TTC39BQ5VTQ0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TTC39BQ5VTQ0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TTC39BQ5VTQ0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
TTC39BQ5VTQ0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.33■□□□□ 0.05
TTC39BQ5VTQ0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TTC39BQ5VTQ0 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TTC39BQ5VTQ0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TTC39BQ5VTQ0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.33■□□□□ 0.05
TTC39BQ5VTQ0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TTC39BQ5VTQ0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.33■□□□□ 0.05
TTC39BQ5VTQ0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TTC39BQ5VTQ0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.33■□□□□ 0.05
TTC39BQ5VTQ0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 AL928921.2-201ENST00000641325 2442 ntBASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 MIR1908-201ENST00000410394 80 ntBASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 BX088702.1-201ENST00000610784 235 ntBASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 INE2-201ENST00000630399 1874 ntBASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TTC39BQ5VTQ0 BEND3P1-201ENST00000421591 1944 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms