Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 KRT18P36-201ENST00000411618 1276 ntBASIC15.57■□□□□ 0.08
VARS2Q5ST30 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 XBP1P1-201ENST00000436573 652 ntBASIC15.57■□□□□ 0.08
VARS2Q5ST30 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 AP001830.1-201ENST00000528717 692 ntTSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 AC242376.1-201ENST00000559033 726 ntBASIC15.57■□□□□ 0.08
VARS2Q5ST30 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 AC012044.1-201ENST00000603431 297 ntBASIC15.57■□□□□ 0.08
VARS2Q5ST30 AL357094.1-201ENST00000603845 844 ntBASIC15.57■□□□□ 0.08
VARS2Q5ST30 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.57■□□□□ 0.08
VARS2Q5ST30 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 AC092299.1-201ENST00000632679 757 ntBASIC15.57■□□□□ 0.08
VARS2Q5ST30 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 NFIC-211ENST00000641145 8399 ntBASIC15.57■□□□□ 0.08
VARS2Q5ST30 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
VARS2Q5ST30 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VARS2Q5ST30 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 AC234782.1-201ENST00000451950 919 ntBASIC15.56■□□□□ 0.08
VARS2Q5ST30 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 POU5F1P2-201ENST00000521750 823 ntBASIC15.56■□□□□ 0.08
VARS2Q5ST30 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 MIR4754-201ENST00000582477 89 ntBASIC15.56■□□□□ 0.08
VARS2Q5ST30 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARS2Q5ST30 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.56■□□□□ 0.08
VARS2Q5ST30 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms