Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.18□□□□□ -0.3
SCN1BQ07699 AC020910.6-201ENST00000623084 1459 ntBASIC13.18□□□□□ -0.3
SCN1BQ07699 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SCN1BQ07699 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.18□□□□□ -0.3
SCN1BQ07699 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.18□□□□□ -0.3
SCN1BQ07699 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 RPL37AP1-201ENST00000412502 279 ntBASIC13.18□□□□□ -0.3
SCN1BQ07699 TSEN15P1-201ENST00000423257 515 ntBASIC13.18□□□□□ -0.3
SCN1BQ07699 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.18□□□□□ -0.3
SCN1BQ07699 AP006288.1-201ENST00000446065 395 ntBASIC13.18□□□□□ -0.3
SCN1BQ07699 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.18□□□□□ -0.3
SCN1BQ07699 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
SCN1BQ07699 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SCN1BQ07699 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.18□□□□□ -0.3
SCN1BQ07699 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.18□□□□□ -0.3
SCN1BQ07699 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.18□□□□□ -0.3
SCN1BQ07699 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.18□□□□□ -0.3
SCN1BQ07699 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.18□□□□□ -0.3
SCN1BQ07699 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.18□□□□□ -0.3
SCN1BQ07699 AL691403.2-201ENST00000618460 490 ntBASIC13.18□□□□□ -0.3
SCN1BQ07699 Z92544.3-201ENST00000624747 417 ntBASIC13.18□□□□□ -0.3
SCN1BQ07699 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.18□□□□□ -0.3
SCN1BQ07699 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SCN1BQ07699 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.18□□□□□ -0.3
SCN1BQ07699 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.18□□□□□ -0.3
SCN1BQ07699 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SCN1BQ07699 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SCN1BQ07699 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SCN1BQ07699 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.18□□□□□ -0.3
SCN1BQ07699 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SCN1BQ07699 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN1BQ07699 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SCN1BQ07699 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 AC111170.3-201ENST00000624282 2464 ntBASIC13.17□□□□□ -0.3
SCN1BQ07699 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.17□□□□□ -0.3
SCN1BQ07699 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
SCN1BQ07699 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.17□□□□□ -0.3
SCN1BQ07699 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.17□□□□□ -0.3
SCN1BQ07699 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.17□□□□□ -0.3
SCN1BQ07699 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.17□□□□□ -0.3
SCN1BQ07699 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
SCN1BQ07699 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
SCN1BQ07699 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.17□□□□□ -0.3
SCN1BQ07699 AL033527.5-202ENST00000641632 1098 ntBASIC13.17□□□□□ -0.3
SCN1BQ07699 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SCN1BQ07699 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.17□□□□□ -0.3
SCN1BQ07699 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
SCN1BQ07699 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
SCN1BQ07699 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.17□□□□□ -0.3
SCN1BQ07699 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN1BQ07699 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms