Protein–RNA interactions for Protein: P63132

HERVK_113, Endogenous retrovirus group K member 113 Pol protein, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P63132 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HERVK_113P63132 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HERVK_113P63132 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HERVK_113P63132 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.37□□□□□ -0.11
HERVK_113P63132 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.37□□□□□ -0.11
HERVK_113P63132 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HERVK_113P63132 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
HERVK_113P63132 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
HERVK_113P63132 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
HERVK_113P63132 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.37□□□□□ -0.11
HERVK_113P63132 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.37□□□□□ -0.11
HERVK_113P63132 AL391280.1-201ENST00000506969 1062 ntBASIC14.37□□□□□ -0.11
HERVK_113P63132 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HERVK_113P63132 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.37□□□□□ -0.11
HERVK_113P63132 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.37□□□□□ -0.11
HERVK_113P63132 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.37□□□□□ -0.11
HERVK_113P63132 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.37□□□□□ -0.11
HERVK_113P63132 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HERVK_113P63132 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HERVK_113P63132 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HERVK_113P63132 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HERVK_113P63132 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.37□□□□□ -0.11
HERVK_113P63132 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HERVK_113P63132 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HERVK_113P63132 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HERVK_113P63132 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.37□□□□□ -0.11
HERVK_113P63132 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
HERVK_113P63132 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERVK_113P63132 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HERVK_113P63132 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
HERVK_113P63132 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.36□□□□□ -0.11
HERVK_113P63132 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.36□□□□□ -0.11
HERVK_113P63132 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.36□□□□□ -0.11
HERVK_113P63132 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HERVK_113P63132 AC023794.5-201ENST00000564380 2157 ntBASIC14.36□□□□□ -0.11
HERVK_113P63132 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HERVK_113P63132 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.36□□□□□ -0.11
HERVK_113P63132 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 AC098614.1-201ENST00000368528 745 ntBASIC14.36□□□□□ -0.11
HERVK_113P63132 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.36□□□□□ -0.11
HERVK_113P63132 RN7SKP175-201ENST00000408472 289 ntBASIC14.36□□□□□ -0.11
HERVK_113P63132 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.36□□□□□ -0.11
HERVK_113P63132 ACTG1P3-201ENST00000431775 1114 ntBASIC14.36□□□□□ -0.11
HERVK_113P63132 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.36□□□□□ -0.11
HERVK_113P63132 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.36□□□□□ -0.11
HERVK_113P63132 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.36□□□□□ -0.11
HERVK_113P63132 PTP4A1P2-201ENST00000546033 454 ntBASIC14.36□□□□□ -0.11
HERVK_113P63132 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HERVK_113P63132 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.36□□□□□ -0.11
HERVK_113P63132 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HERVK_113P63132 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
HERVK_113P63132 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HERVK_113P63132 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERVK_113P63132 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.36□□□□□ -0.11
HERVK_113P63132 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.36□□□□□ -0.11
HERVK_113P63132 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HERVK_113P63132 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HERVK_113P63132 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 312.9 ms