Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC10.53□□□□□ -0.72
UBE2D3P61077 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 SLC7A15P-201ENST00000424028 1363 ntBASIC10.53□□□□□ -0.72
UBE2D3P61077 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC10.53□□□□□ -0.72
UBE2D3P61077 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
UBE2D3P61077 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
UBE2D3P61077 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
UBE2D3P61077 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 RNU1-114P-201ENST00000365297 166 ntBASIC10.53□□□□□ -0.72
UBE2D3P61077 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.53□□□□□ -0.72
UBE2D3P61077 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
UBE2D3P61077 SOCS2P1-201ENST00000417727 557 ntBASIC10.53□□□□□ -0.72
UBE2D3P61077 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC10.53□□□□□ -0.72
UBE2D3P61077 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
UBE2D3P61077 GNAQP1-201ENST00000444815 1067 ntBASIC10.53□□□□□ -0.72
UBE2D3P61077 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC10.53□□□□□ -0.72
UBE2D3P61077 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC10.53□□□□□ -0.72
UBE2D3P61077 DUT-210ENST00000559935 569 ntTSL 3 BASIC10.53□□□□□ -0.72
UBE2D3P61077 AC124283.3-201ENST00000570869 594 ntBASIC10.53□□□□□ -0.72
UBE2D3P61077 IFT20-206ENST00000578122 834 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 IFT20-208ENST00000578985 831 ntTSL 3 BASIC10.53□□□□□ -0.72
UBE2D3P61077 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC10.53□□□□□ -0.72
UBE2D3P61077 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 AC093726.1-201ENST00000608064 963 ntBASIC10.53□□□□□ -0.72
UBE2D3P61077 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.53□□□□□ -0.72
UBE2D3P61077 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
UBE2D3P61077 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D3P61077 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D3P61077 AC114271.1-201ENST00000612689 2813 ntBASIC10.53□□□□□ -0.72
UBE2D3P61077 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC10.52□□□□□ -0.72
UBE2D3P61077 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
UBE2D3P61077 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
UBE2D3P61077 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC10.52□□□□□ -0.72
UBE2D3P61077 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
UBE2D3P61077 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC10.52□□□□□ -0.72
UBE2D3P61077 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
UBE2D3P61077 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC10.52□□□□□ -0.72
UBE2D3P61077 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D3P61077 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D3P61077 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D3P61077 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D3P61077 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D3P61077 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D3P61077 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D3P61077 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2D3P61077 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D3P61077 AC020658.7-201ENST00000624274 2442 ntBASIC10.52□□□□□ -0.73
UBE2D3P61077 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D3P61077 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D3P61077 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
UBE2D3P61077 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2D3P61077 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
UBE2D3P61077 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms